[yt-users] Problem in running parallel yt on stampede

Nathan Goldbaum nathan12343 at gmail.com
Sun Jul 5 16:02:55 PDT 2015


How did mpi4py get installed?

You may need to troubleshoot this with the Stampede sysadmins, since the
error is being raised by the MPI library you're using.

On Sunday, July 5, 2015, rahul kashyap <rahulkashyap411 at gmail.com> wrote:

> Dear yt-users,
>
> I'm trying to use parallel yt on stampede and got this error --
> LiMIC: (limic_open) file open fail
> [unset]: aborting job:
> Fatal error in PMPI_Init_thread:
> Other MPI error, error stack:
> MPIR_Init_thread(436)....:
> MPID_Init(371)...........: channel initialization failed
> MPIDI_CH3_Init(335)......:
> MPIDI_CH3I_SMP_Init(1723): LiMIC2 device does not exist: No such file or
> directory
>
> In the interactive ipython, import yt and import mpi4py works ok but,
> yt.enable_parallelism() gives the same error.
> Serial scripts runs perfectly fine. I've also tried building mpi4py by
> specifying mpicc path; itdoesn't work.
>
> Any help would be highly appreciated. Thanks in advance.
>
> rahul
>
>
>
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