[yt-users] yt installation issues

[Kaylea Nelson]

Cool, that seems to have run ok! But it didn't generate the bin/activate
script?


On Tue, May 13, 2014 at 3:21 PM, Kacper Kowalik <xarthisius.kk at gmail.com>wrote:

> On 13.05.2014 20:00, Kaylea Nelson wrote:
> > Hi Matt,
>
> > Failure.  Check
> >
> /home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
> >  The last 10 lines are above.
> >
> >
> > On a related note, whenever I install either version, the install also
> > fails when installing ZeroMQ:
> >
> > Installing mercurial-3.0
> > Setting
> >
> YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
> > Installing distribute
> > Installing pip
> > Installing numpy-1.7.1
> > Installing matplotlib-1.3.0
> > Installing ZeroMQ
> > ********************************************
> >         FAILURE REPORT:
> > ********************************************
> >
> >   CXX    libzmq_la-ipc_address.lo
> >   CXX    libzmq_la-ipc_connecter.lo
> > stream_engine.hpp(97): error #82: storage class is not first
> >           const static size_t greeting_size = 12;
> >                 ^
> >
> > compilation aborted for ipc_connecter.cpp (code 2)
> > make[1]: *** [libzmq_la-ipc_connecter.lo] Error 1
> > make[1]: Leaving directory
> >
> `/lustre/home/client/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/zeromq-3.2.4/src'
> > make: *** [install-recursive] Error 1
> >
> > ********************************************
> > ********************************************
> > Failure.  Check
> >
> /home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
> >  The last 10 lines are above.
> >
> > But I just fix the const static to static const in stream_engine.hpp and
> it
> > gets past that particular error (in the stable version anyway). Let me
> know
> > if I shouldn't be messing with that.
> >
> > Actually, it appears to get YT_DIR the correctly the first time through,
> > but when I restart it after fixing the ZeroMQ bug, it fails to set
> YT_DIR.
> > So, just to be extra thorough, I tried manually setting YT_DIR on l.54 to
> >
> /home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
> > (as it was set the first time). If I do this, it gets past the above
> error
> > and I ultimately get the same error as for the stable version (the
> original
> > reason of this email):
> >
> > [hit enter]
> >
> > Awesome!  Here we go.
> >
> > Using wget
> > Using sha512sum
> > Downloading xray_emissivity.h5 from yt-project.org
> > Installing distribute
> > Installing pip
> > Installing ZeroMQ
> > Installing pyzmq-13.1.0 (arguments:
> > '--zmq=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64')
> > Installing tornado-3.1
> > Installing ipython-1.1.0
> > Installing h5py-2.1.3
> > Installing Cython-0.19.1
> > Installing Forthon-0.8.11
> > Installing nose-1.3.0
> > Installing python-hglib-1.0
> > Installing sympy-0.7.3
>
> Hi Kaylea!
>
> [snip]
> > Doing yt update, wiping local changes and updating to branch yt-3.0
> > Installing yt
>
> [snip]
>
> at this point you should have everything that's required to build yt.
> Let's try to install it manually outside of the install_script.sh.
> Setting following env vars should do the trick:
>
> export
> YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64
> export PATH=$YT_DIR/bin:$PATH
> export LD_LIBRARY_PATH=$YT_DIR/lib:$LD_LIBRARY_PATH
> export PYTHONPATH=$YT_DIR/lib/python2.7/site-packages:$PYTHONPATH
> export HDF5_DIR=$YT_DIR
> export PNG_DIR=$YT_DIR
>
> then
>
> cd $YT_DIR/src/yt-hg
> hg update -C yt-3.0
> python setup.py install --prefix=$YT_DIR
>
> Could you please try it out? In the mean time I'll try to setup Red Hat
> 6 based environment to reproduce your issue.
>
> Cheers,
> Kacper
>
>
>
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>
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