[yt-users] (no subject)

[Hilary Egan]

Setting HOME to the working directory worked! Thank you so much!

-Hilary


> Hi Hilary,
> This is increasingly looking like a matplotlib bug -- but there is one
> other thing you could try. Looking at the matplotlib source, it looks
> like it checks HOME, USERPROFILE and TMP to see if they are None. So
> you could try setting one of those three variables to the current
> working directory of your script. Otherwise, maybe file an issue with
> matplotlib?
> Sorry ... :(
> -Matt
> On Thu, Oct 10, 2013 at 12:49 PM, Hilary Egan <hilaryye at gmail.com<http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org>>
> wrote:
> >* Unfortunately setting XDG_CONFIG_HOME as the working directory didn't
> work.
> *>* I get this error message http://paste.yt-project.org/show/3941/ which
> *>* appears to be the same problem as before.
> *>
> >* -Hilary
> *>
> >>* ________________________________
> *>>
> >>* Hi Hilary,
> *>>
> >>* Yeah ... this is actually a problem with funny home directories and
> *>>* Matplotlib 1.3.0. I think this is a problem specific to machines
> *>>* where the home directories aren't visible. You may be able to either
> *>>* set the environment variable XDG_CONFIG_HOME to the working directory
> *>>* for some success.
> *>>
> >>* Additionally, I think that yt.pmods no longer works with matplotlib
> *>>* 1.3.0, too, but it looks like you're using yt.mods, so that's good.
> *>>
> >>* Could you let us know if that works?
> *>>
> >>* -Matt
> *>>
> >>* On Wed, Oct 9, 2013 at 10:42 PM, Hilary Egan <hilaryye at gmail.com>
> *>>* wrote:
> *>>* > Perhaps inadvisedly I'm trying to get parallel yt to work on
> kraken. As
> *>>* > suggested in the docs faq I made sure I loaded the PrgEnv-gnu
> module and
> *>>* > pip
> *>>* > installed mpi4py with env MPICC=cc. Although this worked fine as
> is on
> *>>* > my
> *>>* > local machine, yt then complained about missing libraries, I
> guessed
> *>>* > because
> *>>* > of some sort of static linking/build problem, so I copied all of
> the
> *>>* > libraries it complained about to $YT_DIR/lib (full list is below).
> Now
> *>>* > it's
> *>>* > giving me a completely indecipherable message about matplotlib
> which
> *>>* > I've
> *>>* > copied here: http://paste.yt-project.org/show/3939/.<http://paste.yt-project.org/show/3939/>I only see this
> *>>* > error
> *>>* > when I try and run yt with the --parallel flag, so I'm guessing it
> must
> *>>* > be
> *>>* > related. Any advice would be greatly appreciated!
> *>>* >
> *>>* > Thanks,
> *>>* > Hilary
> *>>* >
> *>>* > ______
> *>>* >
> *>>* > Missing libraries yt complained about and I added:
> *>>* >
> *>>* > libgfortran.so.3
> *>>* > libscicpp_gnu.so.1
> *>>* > libsci_gnu_mp.so.1
> *>>* > libstdc++.so.6
> *>>* > libfttw3.so.3
> *>>* > libfftw3f.so.3
> *>>* > libmpich_gnu.so.gnu-46-1
> *>>* > libmpl.so.0
> *>>* > libpmi.so.0
> *>>* > libgomp.so.1
> *>>* > libquadmath.so.0
> *>>* > libmpich.so.1
> *>>* > libgcc_s.so.1
> *>>* > libportals.so.1
> *>>* > libalpsutil.so
> *>>* > libalpslli.so
> *>>* >
> *>>* >
> *>>* > _______________________________________________
> *>>* > yt-users mailing list
> *>>* > yt-users at lists.spacepope.org
> *>>* > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
> *>>
> >>
> >
> >* _______________________________________________
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> ------------------------------
>
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