[yt-users] RuntimeError with surface
Slavin, Jonathan
jslavin at cfa.harvard.edu
Wed Mar 2 09:15:44 PST 2016
Hi all,
I have some 3D data that I'd like to visualize using iso-surfaces. The
data are for an explosion at the center and in cartesian coordinates with
reflecting boundary conditions on the left edges such that it is expanding
in one octant of a 3D space. I have tried a few different approaches and I
keep running into the RuntimeError:
"Error: yt attempted to read outside the boundaries of a non-periodic
domain along dimension 0.
...
This commonly happens when trying to compute ghost cells up to the domain
boundary. Two possible solutions are to load a smaller region that does not
border the edge or override the periodicity for this dataset."
So this is after I loaded a smaller region. I don't want to exclude the
planes along x = 0, y= 0 and z = 0 because then I'll be excluding the
explosion center. It's not clear to me how to "exclude the periodicity for
the dataset". Any help would be appreciated.
Thanks,
Jon
--
________________________________________________________
Jonathan D. Slavin Harvard-Smithsonian CfA
jslavin at cfa.harvard.edu 60 Garden Street, MS 83
phone: (617) 496-7981 Cambridge, MA 02138-1516
cell: (781) 363-0035 USA
________________________________________________________
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