[yt-users] yt 3.3.1 not working with yt 3.1 python scripts

[tazkera haque]

Hi John,

Thanks for the idea and sounds like a quick fix for now, I will do that.

and our particle files are more frequent than plotfiles, so when there are
50 plt-files  there might be 100 part files at that time step.

Best
Tazkera

On Fri, Aug 26, 2016 at 3:06 PM, John ZuHone <jzuhone at gmail.com> wrote:

> Hi Tazkera,
>
> It looks like you _don’t_ want the particle files to be loaded, correct?
>
> This will probably require a fix to the code to make sure that this
> doesn’t happen automatically, but in the meantime you could create a folder
> for the particle files and simply move them in there. This is very hacky,
> but it will get the job done right now while you wait for a fix (which I’ll
> try to set up today, but may take several days to get merged into the main
> branch).
>
> How far off are the times in the particle files and plot files?
>
> Best,
>
> John
>
> On Aug 26, 2016, at 1:40 PM, tazkera haque <h.tazkera at gmail.com> wrote:
>
> Hi Nathan,
>
> I have just updated yt 3.3 and now I have this weird issue with the
> scripts , I am uploading my script for sliceplots, which should just
> analyse the super3d_hdf5_plt_cnt files but I have got issues which also
> pulls up the super3d_hdf5_part files which are also located in the same
> path and produces the error.
>
> *yt : [INFO     ] 2016-08-26 13:23:36,817 Particle file found:
> super3d_hdf5_part_0000*
> *yt : [INFO     ] 2016-08-26 13:23:36,840 integer runtime parameter
> checkpointfilenumber overwrites a simulation scalar of the same name*
> *yt : [INFO     ] 2016-08-26 13:23:36,862 Parameters: current_time
>      = 0.0*
> *yt : [INFO     ] 2016-08-26 13:23:36,862 Parameters: domain_dimensions
>       = [128 128 128]*
> *yt : [INFO     ] 2016-08-26 13:23:36,863 Parameters: domain_left_edge
>      = [ -2.80000000e+10  -2.80000000e+10  -2.80000000e+10]*
> *yt : [INFO     ] 2016-08-26 13:23:36,863 Parameters: domain_right_edge
>       = [  2.80000000e+10   2.80000000e+10   2.80000000e+10]*
> *yt : [INFO     ] 2016-08-26 13:23:36,864 Parameters:
> cosmological_simulation   = 0.0*
> *yt : [INFO     ] 2016-08-26 13:23:38,500 xlim = -28000000000.000000
> 28000000000.000000*
> *yt : [INFO     ] 2016-08-26 13:23:38,500 ylim = -28000000000.000000
> 28000000000.000000*
> *yt : [INFO     ] 2016-08-26 13:23:38,501 xlim = -28000000000.000000
> 28000000000.000000*
> *yt : [INFO     ] 2016-08-26 13:23:38,501 ylim = -28000000000.000000
> 28000000000.000000*
> *yt : [INFO     ] 2016-08-26 13:23:38,502 Making a fixed resolution buffer
> of (('flash', 'temp')) 800 by 800*
> *yt : [INFO     ] 2016-08-26 13:23:39,016 Making a fixed resolution buffer
> of (('flash', 'temp')) 800 by 800*
> *yt : [INFO     ] 2016-08-26 13:23:39,252 Saving plot
> Slice_z_temp/super3d_hdf5_plt_cnt_0000_Slice_z_temp.png*
> *yt : [INFO     ] 2016-08-26 13:23:39,885 Particle file found:
> super3d_hdf5_part_0001*
> *Traceback (most recent call last):*
> *  File "allSlices.py", line 115, in <module>*
> *    ds=yt.load(filename)*
> *  File
> "/work/03858/thaque56/sw/yt-new-3.3/yt-conda/lib/python2.7/site-packages/yt/convenience.py",
> line 86, in load*
> *    return candidates[0](*args, **kwargs)*
> *  File
> "/work/03858/thaque56/sw/yt-new-3.3/yt-conda/lib/python2.7/site-packages/yt/frontends/flash/data_structures.py",
> line 215, in __init__*
> *    raise IOError('%s and  %s are not at the same time.' %
> (self.particle_filename, filename))*
> *IOError: /work/03858/thaque56/runs/run_176/super3d_hdf5_part_0001 and
>  /work/03858/thaque56/runs/run_176/super3d_hdf5_plt_cnt_0001 are not at the
> same time.*
> *[c558-502.stampede.tacc.utexas.edu
> <http://c558-502.stampede.tacc.utexas.edu>:mpispawn_0][child_handler] MPI
> process (rank: 0, pid: 13788) exited with status 1*
> *TACC: MPI job exited with code: 1*
>
> Please take a look at the error and let me know how to avoid the particle
> files in this circumstance.
>
> Best
> Tazkera
>
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