[yt-users] Cluster Compile Issue

[Nathan Goldbaum]

Hi Charles,

Did you have intel compilers loaded when you ran the install script?
 What's the output of 'module list'?

You'll want to make sure that you have GNU compilers loaded and intel
compilers unloaded before running the install script.  If both are loaded
strange things will happen.

-Nathan


On Thu, Jul 25, 2013 at 4:25 PM, Chenchong Zhu <cczhu at astro.utoronto.ca>wrote:

> Hi Kacper (and yt-users),
>
> Thanks for your response!
>
> I should have been more clear and said that I've only been using the yt
> install script to do everything, and was surprised that libimf.so wasn't
> compiled.  The full text of my error is:
>
> (yt-x86_64)gpc-f101n084-$ ipython
> Traceback (most recent call last):
>   File "/home/m/mhvk/czhu/yt-x86_64/bin/ipython", line 5, in <module>
>     from IPython.frontend.terminal.ipapp import launch_new_instance
>   File
> "/home/m/mhvk/czhu/yt-x86_64/lib/python2.7/site-packages/IPython/__init__.py",
> line 43, in <module>
>     from .config.loader import Config
>   File
> "/home/m/mhvk/czhu/yt-x86_64/lib/python2.7/site-packages/IPython/config/__init__.py",
> line 16, in <module>
>     from .application import *
>   File
> "/home/m/mhvk/czhu/yt-x86_64/lib/python2.7/site-packages/IPython/config/application.py",
> line 22, in <module>
>     import logging
>   File "/home/m/mhvk/czhu/yt-x86_64/lib/python2.7/logging/__init__.py",
> line 26, in <module>
>     import sys, os, time, cStringIO, traceback, warnings, weakref
> ImportError: libimf.so: cannot open shared object file: No such file or
> directory
>
>  Best,
>
> Charles
>
> P.S. I wrote a meaningless "(though )" in my last e-mail, which was
> supposed to report that installing ZeroMQ using install_script.bash gives
> the error
>
> "stream_engine.hpp(97): error #82: storage class is not first
>           const static size_t greeting_size = 12"
>
>
> which I had to manually fix in the source to "static const", and then
> rerun install_script.bash.
>
> _______________________________________________
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>
>
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