[yt-users] Ramses plot issues

Sam Leitner sam.leitner at gmail.com
Tue Dec 18 09:30:24 PST 2012


Hi Matt,
Sure, by making the plot "by hand" do you mean something other than:
slc = SlicePlot(pf, 'x', "Density", center=[0.5,0.5,0.5])
slc.save('ramses')
?  In that case, I get the same error (sorry -- the "useful" knowledge of
yt I've accumulated is still very limited).
Sam



On Tue, Dec 18, 2012 at 11:45 AM, Matthew Turk <matthewturk at gmail.com>wrote:

> Hi Sam,
>
> Could you have a try at making the plot and specifying the center by hand?
>
> Matt
> On Dec 18, 2012 9:57 AM, "Sam Leitner" <sam.leitner at gmail.com> wrote:
>
>> Hi yt-users,
>>
>> I'm compiling from the tip of yt-3.0 where plot seems to be broken for
>> Ramses...
>>
>> yt plot
>> tests/output_00001/info_00001.txttests/output_00001/amr_00001.out00001
>> yt : [WARNING  ] 2012-12-18 10:27:10,365 No current mechanism of
>> distinguishing cosmological simulations in RAMSES!
>> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters: current_time
>>      = 0.0
>> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters: domain_dimensions
>>       = [64 64 64]
>> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters: domain_left_edge
>>      = [ 0.  0.  0.]
>> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters: domain_right_edge
>>       = [ 1.  1.  1.]
>> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters:
>> cosmological_simulation   = 1
>> yt : [INFO     ] 2012-12-18 10:27:10,367 Parameters: current_redshift
>>      = 0.0
>> yt : [INFO     ] 2012-12-18 10:27:10,367 Parameters: omega_lambda
>>      = 0.0
>> yt : [INFO     ] 2012-12-18 10:27:10,367 Parameters: omega_matter
>>      = 1.0
>> yt : [INFO     ] 2012-12-18 10:27:10,367 Parameters: hubble_constant
>>       = 1.0
>> yt : [INFO     ] 2012-12-18 10:27:10,367 Adding plot for axis 0
>> yt : [INFO     ] 2012-12-18 10:27:11,597 xlim = 0.000000 1.000000
>> yt : [INFO     ] 2012-12-18 10:27:11,597 ylim = 0.000000 1.000000
>> yt : [INFO     ] 2012-12-18 10:27:11,597 Making a fixed resolution buffer
>> of (('gas', 'Density')) 800 by 800
>> python2.7(2499,0x7fff710f6180) malloc: *** error for object 0x102f20608:
>> incorrect checksum for freed object - object was probably modified after
>> being freed.
>> *** set a breakpoint in malloc_error_break to debug
>> Abort trap: 6
>>
>> and for projection:
>>
>> yt plot -m tests/output_00001/info_00001.txt
>> tests/output_00001/amr_00001.out00001
>> yt : [WARNING  ] 2012-12-18 10:48:46,412 No current mechanism of
>> distinguishing cosmological simulations in RAMSES!
>> yt : [INFO     ] 2012-12-18 10:48:46,412 Parameters: current_time
>>      = 0.0
>> yt : [INFO     ] 2012-12-18 10:48:46,412 Parameters: domain_dimensions
>>       = [64 64 64]
>> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: domain_left_edge
>>      = [ 0.  0.  0.]
>> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: domain_right_edge
>>       = [ 1.  1.  1.]
>> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters:
>> cosmological_simulation   = 1
>> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: current_redshift
>>      = 0.0
>> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: omega_lambda
>>      = 0.0
>> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: omega_matter
>>      = 1.0
>> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: hubble_constant
>>       = 1.0
>> Traceback (most recent call last):
>>   File "/Users/sleitner/repos/yt-3.0-run/yt-x86_64/bin/yt", line 9, in
>> <module>
>>     load_entry_point('yt==3.0dev', 'console_scripts', 'yt')()
>>   File "/Users/sleitner/repos/yt-3.0-artio/yt/utilities/command_line.py",
>> line 1578, in run_main
>>     args.func(args)
>>   File "/Users/sleitner/repos/yt-3.0-artio/yt/utilities/command_line.py",
>> line 97, in run
>>     self(args)
>>   File "/Users/sleitner/repos/yt-3.0-artio/yt/utilities/command_line.py",
>> line 1250, in __call__
>>     v, center = pf.h.find_max("Density")
>> AttributeError: 'RAMSESGeometryHandler' object has no attribute 'find_max'
>>
>>
>> Thanks for your help!
>> Sam Leitner
>>
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>> yt-users at lists.spacepope.org
>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
>>
>>
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