[yt-users] Ramses plot issues

Matthew Turk matthewturk at gmail.com
Tue Dec 18 08:45:18 PST 2012


Hi Sam,

Could you have a try at making the plot and specifying the center by hand?

Matt
On Dec 18, 2012 9:57 AM, "Sam Leitner" <sam.leitner at gmail.com> wrote:

> Hi yt-users,
>
> I'm compiling from the tip of yt-3.0 where plot seems to be broken for
> Ramses...
>
> yt plot
> tests/output_00001/info_00001.txttests/output_00001/amr_00001.out00001
> yt : [WARNING  ] 2012-12-18 10:27:10,365 No current mechanism of
> distinguishing cosmological simulations in RAMSES!
> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters: current_time
>      = 0.0
> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters: domain_dimensions
>     = [64 64 64]
> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters: domain_left_edge
>      = [ 0.  0.  0.]
> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters: domain_right_edge
>     = [ 1.  1.  1.]
> yt : [INFO     ] 2012-12-18 10:27:10,366 Parameters:
> cosmological_simulation   = 1
> yt : [INFO     ] 2012-12-18 10:27:10,367 Parameters: current_redshift
>      = 0.0
> yt : [INFO     ] 2012-12-18 10:27:10,367 Parameters: omega_lambda
>      = 0.0
> yt : [INFO     ] 2012-12-18 10:27:10,367 Parameters: omega_matter
>      = 1.0
> yt : [INFO     ] 2012-12-18 10:27:10,367 Parameters: hubble_constant
>     = 1.0
> yt : [INFO     ] 2012-12-18 10:27:10,367 Adding plot for axis 0
> yt : [INFO     ] 2012-12-18 10:27:11,597 xlim = 0.000000 1.000000
> yt : [INFO     ] 2012-12-18 10:27:11,597 ylim = 0.000000 1.000000
> yt : [INFO     ] 2012-12-18 10:27:11,597 Making a fixed resolution buffer
> of (('gas', 'Density')) 800 by 800
> python2.7(2499,0x7fff710f6180) malloc: *** error for object 0x102f20608:
> incorrect checksum for freed object - object was probably modified after
> being freed.
> *** set a breakpoint in malloc_error_break to debug
> Abort trap: 6
>
> and for projection:
>
> yt plot -m tests/output_00001/info_00001.txt
> tests/output_00001/amr_00001.out00001
> yt : [WARNING  ] 2012-12-18 10:48:46,412 No current mechanism of
> distinguishing cosmological simulations in RAMSES!
> yt : [INFO     ] 2012-12-18 10:48:46,412 Parameters: current_time
>      = 0.0
> yt : [INFO     ] 2012-12-18 10:48:46,412 Parameters: domain_dimensions
>     = [64 64 64]
> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: domain_left_edge
>      = [ 0.  0.  0.]
> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: domain_right_edge
>     = [ 1.  1.  1.]
> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters:
> cosmological_simulation   = 1
> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: current_redshift
>      = 0.0
> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: omega_lambda
>      = 0.0
> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: omega_matter
>      = 1.0
> yt : [INFO     ] 2012-12-18 10:48:46,413 Parameters: hubble_constant
>     = 1.0
> Traceback (most recent call last):
>   File "/Users/sleitner/repos/yt-3.0-run/yt-x86_64/bin/yt", line 9, in
> <module>
>     load_entry_point('yt==3.0dev', 'console_scripts', 'yt')()
>   File "/Users/sleitner/repos/yt-3.0-artio/yt/utilities/command_line.py",
> line 1578, in run_main
>     args.func(args)
>   File "/Users/sleitner/repos/yt-3.0-artio/yt/utilities/command_line.py",
> line 97, in run
>     self(args)
>   File "/Users/sleitner/repos/yt-3.0-artio/yt/utilities/command_line.py",
> line 1250, in __call__
>     v, center = pf.h.find_max("Density")
> AttributeError: 'RAMSESGeometryHandler' object has no attribute 'find_max'
>
>
> Thanks for your help!
> Sam Leitner
>
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>
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