[yt-users] YT installation issues

Agarwal, Shankar sagarwal at ku.edu
Thu Aug 19 07:17:18 PDT 2010


Hi,

I have been trying to build yt on Legion cluster at University College London. My default modules are...

Currently Loaded Modulefiles:
  1) shared                       5) infinipath/base/2.1          9) nedit/5.6
  2) intel/fce/10.1.008           6) infinipath/mpi/intel/2.1    10) mrxvt/0.5.4
  3) intel/cce/10.1.008           7) torque/2.2.1                11) hdf5/1.6.6
  4) intel/mkl/64emt/10.0.2.018   8) moab/5.3.0


I did a module purge. And added gcc module...

Currently Loaded Modulefiles:
  1) GCC/4.4.1


But, the install_script.sh crashes when building matplot with the following warning in the yt_install.log...

gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -I/home/ucapsag/enzo3/src/yt/doc/yt-x86_64/lib/python2.6/site-packages/numpy/core/include -I/usr/local/include -I/usr/include -I. -I/home/ucapsag/enzo3/src/yt/doc/yt-x86_64/lib/python2.6/site-packages/numpy/core/include -Isrc -Iagg24/include -I. -I/home/ucapsag/enzo3/src/yt/doc/yt-x86_64/include/python2.6 -c src/path.cpp -o build/temp.linux-x86_64-2.6/src/path.o
cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++
In file included from /shared/ucl/test/GCC4/lib/gcc/x86_64-unknown-linux-gnu/4.4.1/../../../../include/c++/4.4.1/ext/hash_map:59,
                 from ./CXX/Extensions.hxx:68,
                 from src/path.cpp:8:
/shared/ucl/test/GCC4/lib/gcc/x86_64-unknown-linux-gnu/4.4.1/../../../../include/c++/4.4.1/backward/backward_warning.h:28:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated.


Please let me know what could be happening here.

Shankar



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