[yt-svn] Build failed in Jenkins: py2.7-yt-3.0 #4
Jenkins Daemon
jenkins at hum.astri.umk.pl
Wed Mar 27 06:12:07 PDT 2013
See <http://ladon:8080/job/py2.7-yt-3.0/4/changes>
Changes:
[Matthew Turk <matthewturk at gmail.com>] Merged in juxtaposicion/yt-3.0 (pull request #16)
NMSU ART update
[Christopher Moody <cemoody at ucsc.edu>] removing FMP stuff
[Christopher Moody <cemoody at ucsc.edu>] Merged yt_analysis/yt-3.0 into yt-3.0
[Christopher Moody <cemoody at ucsc.edu>] pep8
[Christopher Moody <cemoody at ucsc.edu>] split the fill routines
[Christopher Moody <cemoody at ucsc.edu>] split the hydro fill routines into root/ level
[Christopher Moody <cemoody at ucsc.edu>] split read_amr into root and by level reads
[Christopher Moody <cemoody at ucsc.edu>] fixing _file in io.py
[Christopher Moody <cemoody at ucsc.edu>] changes to _file
[Christopher Moody <cemoody at ucsc.edu>] fixed typo
[Christopher Moody <cemoody at ucsc.edu>] fixing case when particles not laoded in
[Christopher Moody <cemoody at ucsc.edu>] changes to smallest dx
[Christopher Moody <cemoody at ucsc.edu>] making art file matching more generic
[Christopher Moody <cemoody at ucsc.edu>] Merged yt_analysis/yt-3.0 into yt-3.0
[Christopher Moody <cemoody at ucsc.edu>] fixed with to 1.0/dimensions
[Christopher Moody <cemoody at ucsc.edu>] adding more verbosity to level loading
[Christopher Moody <cemoody at ucsc.edu>] fixing domain_width; smallest dx now works
[Christopher Moody <cemoody at ucsc.edu>] found np.in1d, sped things up
[Christopher Moody <cemoody at ucsc.edu>] cleaner
[Christopher Moody <cemoody at ucsc.edu>] fixing typos
[Christopher Moody <cemoody at ucsc.edu>] added option to initialize the center, subselect particle type
[Christopher Moody <cemoody at ucsc.edu>] rewrote io to get particle field types working, faster particle loading
[Christopher Moody <cemoody at ucsc.edu>] fmp functional, completes without errors
[Christopher Moody <cemoody at ucsc.edu>] finished testing ParticleDensityCenter
[Christopher Moody <cemoody at ucsc.edu>] added center finding for particle density
[Christopher Moody <cemoody at ucsc.edu>] first pass at find max progenitor, a naive 'halo' finder
[Christopher Moody <cemoody at ucsc.edu>] cleaning up fields some more
[Christopher Moody <cemoody at ucsc.edu>] fixing units on fields
[Christopher Moody <cemoody at ucsc.edu>] added credits
[Christopher Moody <cemoody at ucsc.edu>] wrapping to 80 characters
[Christopher Moody <cemoody at ucsc.edu>] autopep8 on tests
[Christopher Moody <cemoody at ucsc.edu>] autopep8 on definitions
[Christopher Moody <cemoody at ucsc.edu>] autopep8 on fields
[Christopher Moody <cemoody at ucsc.edu>] autopep8 on io
[Christopher Moody <cemoody at ucsc.edu>] autopep8 on datastructures
[Christopher Moody <cemoody at ucsc.edu>] now we accept (particle_type,particle_field)
[Christopher Moody <cemoody at ucsc.edu>] change in data container key deletion
[Christopher Moody <cemoody at ucsc.edu>] reverted the field determintaion
[Christopher Moody <cemoody at ucsc.edu>] answer testing update
[Christopher Moody <cemoody at ucsc.edu>] first draft of ART testing
[Christopher Moody <cemoody at ucsc.edu>] deleting fields now determines the field first
[Christopher Moody <cemoody at ucsc.edu>] Stupid enumerate(range))
[Christopher Moody <cemoody at ucsc.edu>] removing print statemnet
[Christopher Moody <cemoody at ucsc.edu>] adding ParticleMassMsun
[Christopher Moody <cemoody at ucsc.edu>] slicing needs the center passed
[Christopher Moody <cemoody at ucsc.edu>] reverting back to periodic region
[Christopher Moody <cemoody at ucsc.edu>] merged with yt_analysis/yt-3.0
[Christopher Moody <cemoody at ucsc.edu>] removed pdb
[Christopher Moody <cemoody at ucsc.edu>] cgs particle masses now work
[Christopher Moody <cemoody at ucsc.edu>] fixes for particles mass asssignment
[Christopher Moody <cemoody at ucsc.edu>] can now feed filenames for particle files
[Christopher Moody <cemoody at ucsc.edu>] fixing ires
[Christopher Moody <cemoody at ucsc.edu>] fixing super long debug line
[Christopher Moody <cemoody at ucsc.edu>] turning assert into a warning
[Christopher Moody <cemoody at ucsc.edu>] adding spread ages field
[Christopher Moody <cemoody at ucsc.edu>] typo
[Christopher Moody <cemoody at ucsc.edu>] asserting ages are similar b/w amr and stars
[Christopher Moody <cemoody at ucsc.edu>] draft of particle age support
[Christopher Moody <juxtaposicion at gmail.com>] Merge
[Christopher Moody <cemoody at ucsc.edu>] subtle subchunking problems; disabling for now
[Christopher Moody <cemoody at ucsc.edu>] offset particle positions by 1.0/domain dimension
[Christopher Moody <cemoody at ucsc.edu>] adding stellar index to pf
[Christopher Moody <cemoody at ucsc.edu>] typo in particle field definition for vel-z
[Christopher Moody <cemoody at ucsc.edu>] added particle mass unit conversion; pf['Time']=1.0
[Christopher Moody <cemoody at ucsc.edu>] fixes for stellar fields
[Christopher Moody <cemoody at ucsc.edu>] more fixes to particle IO
[Christopher Moody <cemoody at ucsc.edu>] confused np with numpber of particles / numpy
[Christopher Moody <cemoody at ucsc.edu>] Modified left_indices; now seems to work for Trujillo-Gomez datasets
May have had silent problems in Ceverino datasets
[Christopher Moody <cemoody at ucsc.edu>] evaluating the root level when reading in just the header
[Christopher Moody <cemoody at ucsc.edu>] starting to make modification to make Trujillo-Gomez simulations work
[Christopher Moody <cemoody at ucsc.edu>] limit level works now
[Christopher Moody <cemoody at ucsc.edu>] without the pdb
[Christopher Moody <cemoody at ucsc.edu>] generalizing is_valid to check the binary amr header
[Christopher Moody <cemoody at ucsc.edu>] sucbhunking wasn't actually working
[Christopher Moody <cemoody at ucsc.edu>] fixed subchunking; projections looked good, slices not so much
[Christopher Moody <cemoody at ucsc.edu>] fixing bug data structures for multiple fields
[Christopher Moody <cemoody at ucsc.edu>] Adding a bit of documentation to the Cython routines
[Christopher Moody <cemoody at ucsc.edu>] fixed up fields in particle io
[Christopher Moody <cemoody at ucsc.edu>] removed pdb
[Christopher Moody <cemoody at ucsc.edu>] working particle IO
[Christopher Moody <cemoody at ucsc.edu>] truncating the number of stars rad
[Christopher Moody <cemoody at ucsc.edu>] draft of particle support
[Christopher Moody <cemoody at ucsc.edu>] skeletal particle support
[Christopher Moody <cemoody at ucsc.edu>] reorder definitions to show diff between stars/dm
[Christopher Moody <juxtaposicion at gmail.com>] subchunking fill level does not appear to reduce memory consumption
[Christopher Moody <juxtaposicion at gmail.com>] sub chunking works
[Christopher Moody <cemoody at ucsc.edu>] built the ART octree container, subclasses ramses
[Christopher Moody <juxtaposicion at gmail.com>] Merge
[Christopher Moody <juxtaposicion at gmail.com>] cleaning up IO<->data structures
[Christopher Moody <juxtaposicion at gmail.com>] turning off checks
[Christopher Moody <juxtaposicion at gmail.com>] still segfaulting
[Christopher Moody <cemoody at ucsc.edu>] removed noct_range
[Christopher Moody <cemoody at ucsc.edu>] segfaulting on oct selection
[Christopher Moody <cemoody at ucsc.edu>] removing changes to oct container
[Christopher Moody <cemoody at ucsc.edu>] working on subchunking
[Christopher Moody <cemoody at ucsc.edu>] removing bounds checking now that im not debuggin
[Christopher Moody <cemoody at ucsc.edu>] first pass at subchunking
[Christopher Moody <cemoody at ucsc.edu>] typo
[Christopher Moody <cemoody at ucsc.edu>] choosing this root mesh orientation; still not sure
[Christopher Moody <cemoody at ucsc.edu>] root mesh works. not sure about orientation
[Christopher Moody <cemoody at ucsc.edu>] chunk by level works
[Christopher Moody <cemoody at ucsc.edu>] removed pdb
[Christopher Moody <cemoody at ucsc.edu>] root mesh still not working
[Christopher Moody <cemoody at ucsc.edu>] IO refactor complete
[Christopher Moody <cemoody at ucsc.edu>] typo in i -> t
[Christopher Moody <cemoody at ucsc.edu>] updating particle struct format
[Christopher Moody <cemoody at ucsc.edu>] updating to clearer names
[Christopher Moody <cemoody at ucsc.edu>] amr now reads in with new fortran modules
[Christopher Moody <cemoody at ucsc.edu>] changing the format of the parameter structs
[Christopher Moody <cemoody at ucsc.edu>] added new formats to read struct
[Christopher Moody <cemoody at ucsc.edu>] updated the structs to the standard fortran format
[Christopher Moody <cemoody at ucsc.edu>] reversing changes to read struct
[Christopher Moody <cemoody at ucsc.edu>] wiped old fortran utils
[Christopher Moody <cemoody at ucsc.edu>] switched to using fortran utils
[Christopher Moody <cemoody at ucsc.edu>] added a more concise struct format
[Christopher Moody <cemoody at ucsc.edu>] skip now returns the number of elements skipped
[Christopher Moody <cemoody at ucsc.edu>] updated for explicit endianess
------------------------------------------
[...truncated 37616 lines...]
yt : [INFO ] 2013-03-27 14:11:47,565 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:47,565 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:47,605 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:47,606 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:47,606 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:47,640 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:48,161 Saving plot test.ps
.yt : [DEBUG ] 2013-03-27 14:11:48,695 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTQuadTreeProj'>)
yt : [DEBUG ] 2013-03-27 14:11:48,696 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:11:48,772 Reading 262144 cells of ['Density'] fields in 1 blocks
yt : [DEBUG ] 2013-03-27 14:11:48,775 Adding chunk (262144) to tree
yt : [DEBUG ] 2013-03-27 14:11:48,856 Setting field ('gas', 'Density')
yt : [INFO ] 2013-03-27 14:11:48,856 Projection completed
yt : [INFO ] 2013-03-27 14:11:48,858 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:48,859 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:48,860 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:48,894 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:48,894 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:48,894 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:48,928 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:49,392 Saving plot test.ps
.yt : [DEBUG ] 2013-03-27 14:11:50,248 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTCuttingPlane'>)
yt : [DEBUG ] 2013-03-27 14:11:50,277 Reading 9227 cells of ['Density'] fields in 1 blocks
yt : [INFO ] 2013-03-27 14:11:50,279 xlim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:11:50,279 ylim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:11:51,670 Saving plot test.ps
.yt : [DEBUG ] 2013-03-27 14:11:52,240 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [INFO ] 2013-03-27 14:11:52,241 xlim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:11:52,241 ylim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:11:52,241 zlim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:11:52,241 Making a fixed resolutuion buffer of (('gas', 'Density')) 800 by 800
yt : [DEBUG ] 2013-03-27 14:11:52,242 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:11:52,243 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:11:52,247 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:11:52,261 Reading 262144 cells of ['Density'] fields in 1 blocks
yt : [DEBUG ] 2013-03-27 14:11:52,478 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:11:52,488 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [INFO ] 2013-03-27 14:11:52,931 Saving plot test.ps
.yt : [DEBUG ] 2013-03-27 14:11:53,462 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSlice'>)
yt : [DEBUG ] 2013-03-27 14:11:53,466 Reading 4096 cells of ['Density'] fields in 1 blocks
yt : [INFO ] 2013-03-27 14:11:53,467 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:53,467 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:53,468 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:53,507 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:53,508 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:53,508 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:53,542 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:54,414 Saving plot test.pdf
.yt : [DEBUG ] 2013-03-27 14:11:55,074 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTQuadTreeProj'>)
yt : [DEBUG ] 2013-03-27 14:11:55,076 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:11:55,152 Reading 262144 cells of ['Density'] fields in 1 blocks
yt : [DEBUG ] 2013-03-27 14:11:55,156 Adding chunk (262144) to tree
yt : [DEBUG ] 2013-03-27 14:11:55,266 Setting field ('gas', 'Density')
yt : [INFO ] 2013-03-27 14:11:55,266 Projection completed
yt : [INFO ] 2013-03-27 14:11:55,268 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:55,269 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:55,270 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:55,304 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:55,304 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:55,304 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:55,338 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:55,805 Saving plot test.pdf
.yt : [DEBUG ] 2013-03-27 14:11:56,412 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSlice'>)
yt : [DEBUG ] 2013-03-27 14:11:56,415 Reading 4096 cells of ['Density'] fields in 1 blocks
yt : [INFO ] 2013-03-27 14:11:56,416 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:56,417 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:56,417 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:56,456 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:56,457 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:56,457 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:56,491 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:57,011 Saving plot test.pdf
.yt : [DEBUG ] 2013-03-27 14:11:57,667 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTQuadTreeProj'>)
yt : [DEBUG ] 2013-03-27 14:11:57,668 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:11:57,745 Reading 262144 cells of ['Density'] fields in 1 blocks
yt : [DEBUG ] 2013-03-27 14:11:57,749 Adding chunk (262144) to tree
yt : [DEBUG ] 2013-03-27 14:11:57,830 Setting field ('gas', 'Density')
yt : [INFO ] 2013-03-27 14:11:57,830 Projection completed
yt : [INFO ] 2013-03-27 14:11:57,832 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:57,833 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:57,834 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:57,868 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:57,868 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:57,868 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:57,902 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:58,734 Saving plot test.pdf
.yt : [DEBUG ] 2013-03-27 14:11:59,356 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSlice'>)
yt : [DEBUG ] 2013-03-27 14:11:59,360 Reading 4096 cells of ['Density'] fields in 1 blocks
yt : [INFO ] 2013-03-27 14:11:59,362 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:59,362 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:59,362 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:59,402 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:59,402 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:11:59,402 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:59,436 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:11:59,959 Saving plot test.pdf
.yt : [DEBUG ] 2013-03-27 14:12:00,614 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTQuadTreeProj'>)
yt : [DEBUG ] 2013-03-27 14:12:00,615 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:12:00,692 Reading 262144 cells of ['Density'] fields in 1 blocks
yt : [DEBUG ] 2013-03-27 14:12:00,696 Adding chunk (262144) to tree
yt : [DEBUG ] 2013-03-27 14:12:00,776 Setting field ('gas', 'Density')
yt : [INFO ] 2013-03-27 14:12:00,777 Projection completed
yt : [INFO ] 2013-03-27 14:12:00,778 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:12:00,780 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:12:00,780 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:12:00,814 xlim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:12:00,814 ylim = 0.000000 1.000000
yt : [INFO ] 2013-03-27 14:12:00,815 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:12:00,849 Making a fixed resolution buffer of (('gas', 'Density')) 800 by 800
yt : [INFO ] 2013-03-27 14:12:01,312 Saving plot test.pdf
.yt : [DEBUG ] 2013-03-27 14:12:02,285 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTCuttingPlane'>)
yt : [DEBUG ] 2013-03-27 14:12:02,314 Reading 9227 cells of ['Density'] fields in 1 blocks
yt : [INFO ] 2013-03-27 14:12:02,316 xlim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:12:02,316 ylim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:12:03,708 Saving plot test.pdf
.yt : [DEBUG ] 2013-03-27 14:12:04,469 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [INFO ] 2013-03-27 14:12:04,470 xlim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:12:04,470 ylim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:12:04,470 zlim = -0.500000 0.500000
yt : [INFO ] 2013-03-27 14:12:04,471 Making a fixed resolutuion buffer of (('gas', 'Density')) 800 by 800
yt : [DEBUG ] 2013-03-27 14:12:04,472 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:12:04,472 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:12:04,476 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:12:04,490 Reading 262144 cells of ['Density'] fields in 1 blocks
yt : [DEBUG ] 2013-03-27 14:12:04,707 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [DEBUG ] 2013-03-27 14:12:04,717 Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt : [INFO ] 2013-03-27 14:12:05,159 Saving plot test.pdf
.
======================================================================
FAIL: Accessing_AbsDivV_4
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib64/python2.7/site-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "<http://ladon:8080/job/py2.7-yt-3.0/ws/yt/data_objects/tests/test_fields.py",> line 84, in __call__
assert_equal(v1, conv*field._function(field, g))
File "/usr/lib64/python2.7/site-packages/numpy/testing/utils.py", line 257, in assert_equal
return assert_array_equal(actual, desired, err_msg, verbose)
File "/usr/lib64/python2.7/site-packages/numpy/testing/utils.py", line 719, in assert_array_equal
verbose=verbose, header='Arrays are not equal')
File "/usr/lib64/python2.7/site-packages/numpy/testing/utils.py", line 645, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Arrays are not equal
(mismatch 18.75%)
x: array([[[ 2.39887944e+04, 1.59891552e+04, 1.59828956e+04, ...,
1.59840230e+04, 1.60019325e+04, 8.00182752e+03],
[ 1.59836314e+04, 8.00408348e+03, 8.00034049e+03, ...,...
y: array([[[ 2.39887944e+04, 1.59891552e+04, 1.59828956e+04, ...,
1.59840230e+04, 1.60019325e+04, 1.59991037e+04],
[ 1.59836314e+04, 8.00408348e+03, 8.00034049e+03, ...,...
>> raise AssertionError('\nArrays are not equal\n\n(mismatch 18.75%)\n x: array([[[ 2.39887944e+04, 1.59891552e+04, 1.59828956e+04, ...,\n 1.59840230e+04, 1.60019325e+04, 8.00182752e+03],\n [ 1.59836314e+04, 8.00408348e+03, 8.00034049e+03, ...,...\n y: array([[[ 2.39887944e+04, 1.59891552e+04, 1.59828956e+04, ...,\n 1.59840230e+04, 1.60019325e+04, 1.59991037e+04],\n [ 1.59836314e+04, 8.00408348e+03, 8.00034049e+03, ...,...')
-------------------- >> begin captured logging << --------------------
yt: INFO: Parameters: current_time = 0.0
yt: INFO: Parameters: domain_dimensions = [16 16 16]
yt: INFO: Parameters: domain_left_edge = [ 0. 0. 0.]
yt: INFO: Parameters: domain_right_edge = [ 1. 1. 1.]
yt: INFO: Parameters: cosmological_simulation = 0.0
yt: INFO: Parameters: current_time = 0.0
yt: INFO: Parameters: domain_dimensions = [16 16 16]
yt: INFO: Parameters: domain_left_edge = [ 0. 0. 0.]
yt: INFO: Parameters: domain_right_edge = [ 1. 1. 1.]
yt: INFO: Parameters: cosmological_simulation = 0.0
yt: DEBUG: Initializing data storage.
yt: DEBUG: Setting up classes.
yt: DEBUG: Setting up domain geometry.
yt: DEBUG: Counting grids.
yt: DEBUG: Initializing grid arrays.
yt: DEBUG: Allocating arrays for 4 grids
yt: DEBUG: Parsing hierarchy.
yt: DEBUG: Copying reverse tree
yt: DEBUG: Preparing grids
yt: DEBUG: Prepared 0 / 4 grids
yt: DEBUG: Prepared
yt: DEBUG: Constructing grid objects.
yt: DEBUG: Re-examining hierarchy
yt: DEBUG: Initializing data grid data IO
yt: DEBUG: Detecting fields.
yt: DEBUG: Detecting fields in backup.
yt: DEBUG: Adding unknown detected fields
yt: DEBUG: Checking ['z-velocity', 'y-velocity', 'x-velocity', 'Density']
yt: INFO: Adding unknown field z-velocity to list of fields
yt: INFO: Adding unknown field y-velocity to list of fields
yt: INFO: Adding unknown field x-velocity to list of fields
yt: INFO: Adding unknown field Density to list of fields
yt: DEBUG: Setting up derived fields
yt: DEBUG: Generating vorticity on defaultdict(<function <lambda> at 0x830fc80>, {'dz': array([ 1.]), 'dx': array([ 1.]), 'dy': array([ 1.])})
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 4096 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Reading 4096 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Reading 1024 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 1 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Setting cp_x_vec to [ 1. 0. 0.]
yt: DEBUG: Setting center to [ 0. 0. 0.]
yt: DEBUG: Setting bulk_velocity to [ 0. 0. 0.]
yt: DEBUG: Setting cp_z_vec to [ 0. 0. 1.]
yt: DEBUG: Setting normal to [ 0. 0. 1.]
yt: DEBUG: Setting cp_y_vec to [ 0. 1. 0.]
yt: DEBUG: Setting axis to 0
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 2560 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
yt: DEBUG: Reading 1024 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 1 blocks
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTSmoothedCoveringGrid'>)
yt: DEBUG: Setting cp_x_vec to [ 1. 0. 0.]
yt: DEBUG: Setting center to [ 0. 0. 0.]
yt: DEBUG: Setting bulk_velocity to [ 0. 0. 0.]
yt: DEBUG: Setting cp_z_vec to [ 0. 0. 1.]
yt: DEBUG: Setting normal to [ 0. 0. 1.]
yt: DEBUG: Setting cp_y_vec to [ 0. 1. 0.]
yt: DEBUG: Setting axis to 0
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.geometry.geometry_handler.YTRegion'>)
yt: DEBUG: Reading 1600 cells of ['z-velocity', 'y-velocity', 'x-velocity'] fields in 4 blocks
--------------------- >> end captured logging << ---------------------
----------------------------------------------------------------------
Ran 2557 tests in 478.449s
FAILED (failures=1)
Build step 'Custom Python Builder' marked build as failure
Recording test results
Unable to auto-install JDK until the license is accepted.
Unable to auto-install JDK until the license is accepted.
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