[yt-dev] Call for testing: updated install script

Thu Apr 14 11:58:07 PDT 2016

Hi
I am getting the following error

Setting YT_DIR=/data1/visitor/creju/yt_test/yt-x86_64/src/yt-hg/
Installing pip
********************************************
        FAILURE REPORT:
********************************************

updating: yt/utilities/initial_conditions.py 1059/1210 files (87.52%)
updating: yt/frontends/eagle/setup.py 1097/1210 files (90.66%)
updating: yt/frontends/tipsy/data_structures.py 1135/1210 files (93.80%)
updating: yt/frontends/rockstar/fields.py 1173/1210 files (96.94%)
updating: yt/visualization/volume_rendering/transfer_functions.py 1210/1210
files (100.00%)
1210 files updated, 0 files merged, 0 files removed, 0 files unresolved
689 files updated, 0 files merged, 252 files removed, 0 files unresolved
(leaving bookmark @)
ERROR: certificate common name `*.c.ssl.fastly.net' doesn't match requested
host name `bootstrap.pypa.io'.
To connect to bootstrap.pypa.io insecurely, use `--no-check-certificate'.

in the following system

LSB Version:
:core-4.0-amd64:core-4.0-noarch:graphics-4.0-amd64:graphics-4.0-noarch:printing-4.0-amd64:printing-4.0-noarch
Distributor ID: RedHatEnterpriseServer
Description:    Red Hat Enterprise Linux Server release 6.2 (Santiago)
Release:        6.2
Codename:       Santiago

On Thu, Apr 14, 2016 at 11:36 PM, Hsi-Yu Schive <hyschive at ntu.edu.tw> wrote:

> The installation with conda works fine on the Campus cluster. Great!
>
> Justin
>
> 2016-04-14 10:12 GMT-05:00 Nathan Goldbaum <nathan12343 at gmail.com>:
>
>>
>>
>> On Thu, Apr 14, 2016 at 8:44 AM, John Zuhone <jzuhone at gmail.com> wrote:
>>
>>> Hi Nathan,
>>>
>>> On El Capitan, running the install script with the default options, I
>>> get this:
>>>
>>> ========================================================================
>>>
>>> Hi there!  This is the yt installation script.  We're going to download
>>> some stuff and install it to create a self-contained, isolated
>>> environment for yt to run within.
>>>
>>> Inside the installation script you can set a few variables.  Here's what
>>> they're currently set to -- you can hit Ctrl-C and edit the values in
>>> the script if you aren't such a fan.
>>>
>>> INST_PY3           = 0 so I won't be installing Python 3
>>> INST_HG            = 1 so I will  be installing Mercurial
>>> INST_UNSTRUCTURED  = 0 so I won't be installing unstructured mesh
>>> rendering
>>> INST_PYX           = 0 so I won't be installing PyX
>>> INST_ROCKSTAR      = 0 so I won't be installing Rockstar
>>> INST_H5PY          = 1 so I will  be installing h5py
>>> INST_ASTROPY       = 0 so I won't be installing astropy
>>> INST_NOSE          = 1 so I will  be installing nose
>>>
>>>
>>> Installation will be to
>>>   /Users/jzuhone/Source/yt-ng/doc/yt-conda
>>>
>>> and I'll be logging the installation in
>>>   /Users/jzuhone/Source/yt-ng/doc/yt-conda/yt_install.log
>>>
>>> I think that about wraps it up.  If you want to continue, hit enter.
>>> If you'd rather stop, maybe think things over, even grab a sandwich,
>>> hit Ctrl-C.
>>>
>>> ========================================================================
>>>
>>> [hit enter]
>>>
>>> Awesome!  Here we go.
>>>
>>> Using wget
>>> Using shasum -a 512
>>>
>>> Downloading
>>> http://repo.continuum.io/miniconda/Miniconda2-latest-MacOSX-x86_64.sh
>>>
>>> Installing the Miniconda python environment.
>>> Installing the necessary packages for yt.
>>> This may take a while, but don't worry.  yt loves you.
>>> ********************************************
>>>         FAILURE REPORT:
>>> ********************************************
>>>
>>> installing: pycrypto-2.6.1-py27_0 ...
>>> installing: pip-8.1.1-py27_1 ...
>>> installing: wheel-0.29.0-py27_0 ...
>>> installing: setuptools-20.3-py27_0 ...
>>> Python 2.7.11 :: Continuum Analytics, Inc.
>>> creating default environment...
>>> installation finished.
>>> EXECUTING:
>>>   conda update --yes conda
>>> Error: package 'conda' is not installed in
>>> /Users/jzuhone/Source/yt-ng/doc/yt-conda/envs/python2
>>>
>>> ********************************************
>>> ********************************************
>>> Failure.  Check
>>> /Users/jzuhone/Source/yt-ng/doc/yt-conda/yt_install.log.  The last 10 lines
>>> are above.
>>>
>>
>> This should be fixed by this commit:
>>
>> https://bitbucket.org/ngoldbaum/yt/commits/351fd47
>>
>> Thanks for working this out with me on Slack.
>>
>>
>>>
>>> On Apr 13, 2016, at 11:10 AM, Nathan Goldbaum <nathan12343 at gmail.com>
>>> wrote:
>>>
>>> Hi all,
>>>
>>> I'd appreciate it if people could try running my updated install script
>>> on a variety of platforms. With my changes, the install script sets up a
>>> conda environment by default, but the option to create a bootstrapped
>>> from-source python environment is still implemented. See PR 2009 for
>>> details:
>>>
>>> https://bitbucket.org/yt_analysis/yt/pull-requests/2009
>>>
>>> You can either grab the raw install_script.sh file from my fork:
>>>
>>> $ wget
>>> https://bitbucket.org/ngoldbaum/yt/raw/install-script-updates/doc/install_script.sh
>>>
>>> Or pull from my fork and run the "test_install_script.py" that I've
>>> added. The latter will take a while, because it runs the install script six
>>> times with a variety of permutations in options.
>>>
>>> Thanks for your help!
>>>
>>> -Nathan
>>> _______________________________________________
>>> yt-dev mailing list
>>> yt-dev at lists.spacepope.org
>>> http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org
>>>
>>>
>>>
>>> _______________________________________________
>>> yt-dev mailing list
>>> yt-dev at lists.spacepope.org
>>> http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org
>>>
>>>
>>
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>>
>
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-- 
Reju Sam John
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