<div dir="ltr"><div><div>Dear Suoqing Ji:<br><br></div>The fields Bx,By and Bz are already calculated taking into account the rotation. So I am not sure if I need to calculate it again. <br><br>What I would like is only change the camera view to a desired angle after I do a slice plot and that is where I am having trouble with?<br><br></div>Thanks in advance.<br><div><div><div><div><div><br><br><br><br><br><div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Apr 21, 2016 at 3:20 PM,  <span dir="ltr"><<a href="mailto:yt-users-request@lists.spacepope.org" target="_blank">yt-users-request@lists.spacepope.org</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">Send yt-users mailing list submissions to<br>
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   1. Re: Camera Options (Suoqing Ji)<br>
<br>
<br>
----------------------------------------------------------------------<br>
<br>
Message: 1<br>
Date: Thu, 21 Apr 2016 13:20:32 -0700<br>
From: Suoqing Ji <<a href="mailto:suoqing@physics.ucsb.edu">suoqing@physics.ucsb.edu</a>><br>
To: Discussion of the yt analysis package<br>
        <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>><br>
Subject: Re: [yt-users] Camera Options<br>
Message-ID: <<a href="mailto:FB001F5B-2521-4705-8D31-3166451BCA58@physics.ucsb.edu">FB001F5B-2521-4705-8D31-3166451BCA58@physics.ucsb.edu</a>><br>
Content-Type: text/plain; charset="utf-8"<br>
<br>
I see ? that?s a smart way of doing this!<br>
<br>
Best wishes,<br>
Suoqing<br>
<br>
> On Apr 21, 2016, at 12:44 PM, Nathan Goldbaum <<a href="mailto:nathan12343@gmail.com">nathan12343@gmail.com</a>> wrote:<br>
><br>
><br>
><br>
> On Thu, Apr 21, 2016 at 2:41 PM, Suoqing Ji <<a href="mailto:suoqing@physics.ucsb.edu">suoqing@physics.ucsb.edu</a> <mailto:<a href="mailto:suoqing@physics.ucsb.edu">suoqing@physics.ucsb.edu</a>>> wrote:<br>
> Hi Nathan,<br>
><br>
> I do not have a 3D MHD data at hand, but I?ve tried one with slc.annotate_quiver('velocity_x', 'velocity_y'), which gives the following error:<br>
><br>
>   File "off_axis.py", line 49, in <module><br>
>     slc.save(pf.basename)<br>
>   File "/usr/local/yt3/yt-x86_64/src/yt-hg/yt/visualization/plot_container.py", line 76, in newfunc<br>
>     args[0].run_callbacks()<br>
>   File "/usr/local/yt3/yt-x86_64/src/yt-hg/yt/visualization/plot_window.py", line 1029, in run_callbacks<br>
>     sys.exc_info()[2])<br>
>   File "/usr/local/yt3/yt-x86_64/src/yt-hg/yt/visualization/plot_window.py", line 1025, in run_callbacks<br>
>     callback(cbw)<br>
>   File "/usr/local/yt3/yt-x86_64/src/yt-hg/yt/visualization/plot_modifications.py", line 352, in __call__<br>
>     (xi, yi) = (ds.coordinates.x_axis[ax],<br>
> yt.utilities.exceptions.YTPlotCallbackError: annotate_quiver callback failed with the following error: 4<br>
><br>
><br>
> Right, I bet it will work if you do `annotate_velocity()` though.<br>
><br>
> You should take a look at the definition of the VelocityCallback to see how it handles off-axis slices.<br>
><br>
> Best wishes,<br>
> --<br>
> Suoqing JI<br>
> Ph.D Candidate<br>
> Department of Physics<br>
> University of California, Santa Barbara<br>
> <a href="http://web.physics.ucsb.edu/~suoqing" rel="noreferrer" target="_blank">http://web.physics.ucsb.edu/~suoqing</a> <<a href="http://web.physics.ucsb.edu/~suoqing" rel="noreferrer" target="_blank">http://web.physics.ucsb.edu/~suoqing</a>><br>
>> On Apr 21, 2016, at 12:35 PM, Nathan Goldbaum <<a href="mailto:nathan12343@gmail.com">nathan12343@gmail.com</a> <mailto:<a href="mailto:nathan12343@gmail.com">nathan12343@gmail.com</a>>> wrote:<br>
>><br>
>><br>
>><br>
>> On Thu, Apr 21, 2016 at 2:30 PM, Suoqing Ji <<a href="mailto:suoqing@physics.ucsb.edu">suoqing@physics.ucsb.edu</a> <mailto:<a href="mailto:suoqing@physics.ucsb.edu">suoqing@physics.ucsb.edu</a>>> wrote:<br>
>> Hi Sushi,<br>
>><br>
>> The quiver/streamline option you?ve used works for 2d plotting but not for volume rendering, so I might suggest to use off-axis slice plot: <a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-slices" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-slices</a> <<a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-slices" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-slices</a>><br>
>><br>
>> Unfortunately, quiver/streamline does not work (and/or does not work correctly) for off axis slice plot now, but your goal is still achievable via the following steps:<br>
>><br>
>> Are you sure about that? There's a `CuttingQuiverCallback` for off-axis slices. If you do `annotate_magnetic_fields`, it will automatically choose the `CuttingQuiverCallback` for off-axis slices.<br>
>><br>
>><br>
>> 1. Use fixed resolution buffer to get the off-axis sliced field values including Bx, By and Bz (see this as an example, and replace SlicePlot with OffAxisSlicePlot: <a href="http://yt-project.org/docs/dev/cookbook/complex_plots.html?highlight=fixedresolutionbuffer#multi-plot-slice-and-projections" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/cookbook/complex_plots.html?highlight=fixedresolutionbuffer#multi-plot-slice-and-projections</a> <<a href="http://yt-project.org/docs/dev/cookbook/complex_plots.html?highlight=fixedresolutionbuffer#multi-plot-slice-and-projections" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/cookbook/complex_plots.html?highlight=fixedresolutionbuffer#multi-plot-slice-and-projections</a>>), then you get a 2D array for each field;<br>
>><br>
>> 2. Compute the magnetic field vectors projected onto the rotated viewing plane (perpendicular to your normal vector), based on field values of Bx, By and Bz; now you have two 2D arrays for each components of B field vectors after rotation;<br>
>><br>
>> 3. Use quiver function in matplotlib and plot the B field vectors after rotation, see: <a href="http://matplotlib.org/examples/pylab_examples/quiver_demo.html" rel="noreferrer" target="_blank">http://matplotlib.org/examples/pylab_examples/quiver_demo.html</a> <<a href="http://matplotlib.org/examples/pylab_examples/quiver_demo.html" rel="noreferrer" target="_blank">http://matplotlib.org/examples/pylab_examples/quiver_demo.html</a>><br>
>><br>
>> Hope this helps! Perhaps there?s an easier way that I do not know...<br>
>><br>
>> Best wishes,<br>
>> --<br>
>> Suoqing JI<br>
>> Ph.D Candidate<br>
>> Department of Physics<br>
>> University of California, Santa Barbara<br>
>> <a href="http://web.physics.ucsb.edu/~suoqing" rel="noreferrer" target="_blank">http://web.physics.ucsb.edu/~suoqing</a> <<a href="http://web.physics.ucsb.edu/~suoqing" rel="noreferrer" target="_blank">http://web.physics.ucsb.edu/~suoqing</a>><br>
>>> On Apr 21, 2016, at 10:31 AM, Sushilkumar <<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>>> wrote:<br>
>>><br>
>>> Dear yt:<br>
>>><br>
>>> I am having trouble with the camera option on yt.<br>
>>><br>
>>> The google drive link is <a href="https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc" rel="noreferrer" target="_blank">https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc</a> <<a href="https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc" rel="noreferrer" target="_blank">https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc</a>><br>
>>><br>
>>> I want to change the view of the camera at an angle after the Slice (x-z plane) and Quiver option.<br>
>>><br>
>>> My script is yt_cam_rot.py. Without the camera options I get the desired plot (UniformGridData_Slice.png) but when I use the camera  I get a empty screen. I am not sure where I am going wrong.<br>
>>><br>
>>> I am using these links for my reference<br>
>>><br>
>>> <a href="http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera" rel="noreferrer" target="_blank">http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera</a> <<a href="http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera" rel="noreferrer" target="_blank">http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera</a>><br>
>>> <a href="http://yt-project.org/doc/visualizing/volume_rendering.html#volume-rendering" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/volume_rendering.html#volume-rendering</a> <<a href="http://yt-project.org/doc/visualizing/volume_rendering.html#volume-rendering" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/volume_rendering.html#volume-rendering</a>><br>
>>><br>
>>> Thanks in advance<br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>> On Fri, Apr 15, 2016 at 4:49 PM, Sushilkumar <<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>>> wrote:<br>
>>> Dear Suoqing JI:<br>
>>><br>
>>> Thank you<br>
>>><br>
>>> On Fri, Apr 15, 2016 at 12:59 PM,  <<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>> wrote:<br>
>>> Send yt-users mailing list submissions to<br>
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>>><br>
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>>><br>
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>>> than "Re: Contents of yt-users digest..."<br>
>>><br>
>>><br>
>>> Today's Topics:<br>
>>><br>
>>>    1. Re: Camera Options (Suoqing Ji)<br>
>>><br>
>>><br>
>>> ----------------------------------------------------------------------<br>
>>><br>
>>> Message: 1<br>
>>> Date: Fri, 15 Apr 2016 10:59:22 -0700<br>
>>> From: Suoqing Ji <<a href="mailto:suoqing@physics.ucsb.edu">suoqing@physics.ucsb.edu</a> <mailto:<a href="mailto:suoqing@physics.ucsb.edu">suoqing@physics.ucsb.edu</a>>><br>
>>> To: Discussion of the yt analysis package<br>
>>>         <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> Subject: Re: [yt-users] Camera Options<br>
>>> Message-ID: <<a href="mailto:B885F215-5F0A-49D5-9712-2D8FCEAA1366@physics.ucsb.edu">B885F215-5F0A-49D5-9712-2D8FCEAA1366@physics.ucsb.edu</a> <mailto:<a href="mailto:B885F215-5F0A-49D5-9712-2D8FCEAA1366@physics.ucsb.edu">B885F215-5F0A-49D5-9712-2D8FCEAA1366@physics.ucsb.edu</a>>><br>
>>> Content-Type: text/plain; charset="utf-8"<br>
>>><br>
>>> Hi Sushi,<br>
>>><br>
>>> I think the off-axis slice/projection plot will meet your requirement best, where the camera orientation is determined by the normal vector:<br>
>>><br>
>>> <a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-slices" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-slices</a> <<a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-slices" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-slices</a>> <<a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-slices" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-slices</a> <<a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-slices" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-slices</a>>><br>
>>> <a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-projection-plots" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-projection-plots</a> <<a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-projection-plots" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-projection-plots</a>> <<a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-projection-plots" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-projection-plots</a> <<a href="http://yt-project.org/doc/visualizing/plots.html#off-axis-projection-plots" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/plots.html#off-axis-projection-plots</a>>><br>
>>><br>
>>> And of course, if you?re interested in the features provided by volume rendering, it?s also worth a try. This cookbook gives an example of moving a camera; specifically you might want to use the camera.rotation:<br>
>>><br>
>>> <a href="http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera" rel="noreferrer" target="_blank">http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera</a> <<a href="http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera" rel="noreferrer" target="_blank">http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera</a>> <<a href="http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera" rel="noreferrer" target="_blank">http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera</a> <<a href="http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera" rel="noreferrer" target="_blank">http://yt-project.org/doc/cookbook/complex_plots.html#moving-a-volume-rendering-camera</a>>><br>
>>><br>
>>> Best wishes,<br>
>>> --<br>
>>> Suoqing JI<br>
>>> Ph.D Candidate<br>
>>> Department of Physics<br>
>>> University of California, Santa Barbara<br>
>>> <a href="http://web.physics.ucsb.edu/~suoqing" rel="noreferrer" target="_blank">http://web.physics.ucsb.edu/~suoqing</a> <<a href="http://web.physics.ucsb.edu/~suoqing" rel="noreferrer" target="_blank">http://web.physics.ucsb.edu/~suoqing</a>><br>
>>><br>
>>> > On Apr 15, 2016, at 8:38 AM, Sushilkumar <<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>>> wrote:<br>
>>> ><br>
>>> > Dear yt:<br>
>>> ><br>
>>> > I would like to change/customize/rotate my camera angle for my slice plots without rotating the axis.<br>
>>> ><br>
>>> > What options do I have using yt if I want to move my camera angle by say 45 degrees?<br>
>>> ><br>
>>> > Can I use the following link or can you suggest me something else<br>
>>> > <a href="http://yt-project.org/doc/visualizing/volume_rendering.html" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/volume_rendering.html</a> <<a href="http://yt-project.org/doc/visualizing/volume_rendering.html" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/volume_rendering.html</a>> <<a href="http://yt-project.org/doc/visualizing/volume_rendering.html" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/volume_rendering.html</a> <<a href="http://yt-project.org/doc/visualizing/volume_rendering.html" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/volume_rendering.html</a>>><br>
>>> ><br>
>>> > Thanks in advance<br>
>>> ><br>
>>> ><br>
>>> ><br>
>>> > On Thu, Mar 31, 2016 at 10:11 PM, <<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>>> wrote:<br>
>>> > Send yt-users mailing list submissions to<br>
>>> >         <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> ><br>
>>> > To subscribe or unsubscribe via the World Wide Web, visit<br>
>>> >         <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > or, via email, send a message with subject or body 'help' to<br>
>>> >         <a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>><br>
>>> ><br>
>>> > You can reach the person managing the list at<br>
>>> >         <a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a>>><br>
>>> ><br>
>>> > When replying, please edit your Subject line so it is more specific<br>
>>> > than "Re: Contents of yt-users digest..."<br>
>>> ><br>
>>> ><br>
>>> > Today's Topics:<br>
>>> ><br>
>>> >    1. Inclination problem (Sushilkumar)<br>
>>> ><br>
>>> ><br>
>>> > ----------------------------------------------------------------------<br>
>>> ><br>
>>> > Message: 1<br>
>>> > Date: Thu, 31 Mar 2016 22:11:09 -0500<br>
>>> > From: Sushilkumar <<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>>>><br>
>>> > To: Discussion of the yt analysis package<br>
>>> >         <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>>><br>
>>> > Subject: [yt-users] Inclination problem<br>
>>> > Message-ID:<br>
>>> >         <<a href="mailto:CAKARaKXPyQedHNjW0PwFvrO0qyjFGY4FMU6c2O5_PZWt-OxKEg@mail.gmail.com">CAKARaKXPyQedHNjW0PwFvrO0qyjFGY4FMU6c2O5_PZWt-OxKEg@mail.gmail.com</a> <mailto:<a href="mailto:CAKARaKXPyQedHNjW0PwFvrO0qyjFGY4FMU6c2O5_PZWt-OxKEg@mail.gmail.com">CAKARaKXPyQedHNjW0PwFvrO0qyjFGY4FMU6c2O5_PZWt-OxKEg@mail.gmail.com</a>><mailto:<a href="mailto:CAKARaKXPyQedHNjW0PwFvrO0qyjFGY4FMU6c2O5_PZWt-OxKEg@mail.gmail.com">CAKARaKXPyQedHNjW0PwFvrO0qyjFGY4FMU6c2O5_PZWt-OxKEg@mail.gmail.com</a> <mailto:<a href="mailto:CAKARaKXPyQedHNjW0PwFvrO0qyjFGY4FMU6c2O5_PZWt-OxKEg@mail.gmail.com">CAKARaKXPyQedHNjW0PwFvrO0qyjFGY4FMU6c2O5_PZWt-OxKEg@mail.gmail.com</a>>>><br>
>>> > Content-Type: text/plain; charset="utf-8"<br>
>>> ><br>
>>> > Dear Nathan:<br>
>>> ><br>
>>> > Thank you very much, implementing now<br>
>>> ><br>
>>> ><br>
>>> > On Thu, Mar 31, 2016 at 9:50 AM, <<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>>><br>
>>> > wrote:<br>
>>> ><br>
>>> > > Send yt-users mailing list submissions to<br>
>>> > >         <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > ><br>
>>> > > To subscribe or unsubscribe via the World Wide Web, visit<br>
>>> > >         <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > or, via email, send a message with subject or body 'help' to<br>
>>> > >         <a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>><br>
>>> > ><br>
>>> > > You can reach the person managing the list at<br>
>>> > >         <a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a>>><br>
>>> > ><br>
>>> > > When replying, please edit your Subject line so it is more specific<br>
>>> > > than "Re: Contents of yt-users digest..."<br>
>>> > ><br>
>>> > ><br>
>>> > > Today's Topics:<br>
>>> > ><br>
>>> > >    1. Re: Inclination problem (Nathan Goldbaum)<br>
>>> > ><br>
>>> > ><br>
>>> > > ----------------------------------------------------------------------<br>
>>> > ><br>
>>> > > Message: 1<br>
>>> > > Date: Thu, 31 Mar 2016 09:50:31 -0500<br>
>>> > > From: Nathan Goldbaum <<a href="mailto:nathan12343@gmail.com">nathan12343@gmail.com</a> <mailto:<a href="mailto:nathan12343@gmail.com">nathan12343@gmail.com</a>> <mailto:<a href="mailto:nathan12343@gmail.com">nathan12343@gmail.com</a> <mailto:<a href="mailto:nathan12343@gmail.com">nathan12343@gmail.com</a>>>><br>
>>> > > To: Discussion of the yt analysis package<br>
>>> > >         <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>>><br>
>>> > > Subject: Re: [yt-users] Inclination problem<br>
>>> > > Message-ID:<br>
>>> > >         <CAJXewOnvXjZ+shfKG4SPubn_TYTAbLUu8y9ZRvovzBu=<br>
>>> > > <a href="mailto:DcFZtQ@mail.gmail.com">DcFZtQ@mail.gmail.com</a> <mailto:<a href="mailto:DcFZtQ@mail.gmail.com">DcFZtQ@mail.gmail.com</a>> <mailto:<a href="mailto:DcFZtQ@mail.gmail.com">DcFZtQ@mail.gmail.com</a> <mailto:<a href="mailto:DcFZtQ@mail.gmail.com">DcFZtQ@mail.gmail.com</a>>>><br>
>>> > > Content-Type: text/plain; charset="utf-8"<br>
>>> > ><br>
>>> > > Hi SK,<br>
>>> > ><br>
>>> > > I'm going to reference this example:<br>
>>> > ><br>
>>> > ><br>
>>> > > <a href="http://yt-project.org/doc/visualizing/streamlines.html?highlight=streamlines" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/streamlines.html?highlight=streamlines</a> <<a href="http://yt-project.org/doc/visualizing/streamlines.html?highlight=streamlines" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/streamlines.html?highlight=streamlines</a>> <<a href="http://yt-project.org/doc/visualizing/streamlines.html?highlight=streamlines" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/streamlines.html?highlight=streamlines</a> <<a href="http://yt-project.org/doc/visualizing/streamlines.html?highlight=streamlines" rel="noreferrer" target="_blank">http://yt-project.org/doc/visualizing/streamlines.html?highlight=streamlines</a>>><br>
>>> > ><br>
>>> > > specifically this snippet:<br>
>>> > ><br>
>>> > > for stream in streamlines.streamlines:<br>
>>> > >     stream = stream[np.all(stream != 0.0, axis=1)]<br>
>>> > >     ax.plot3D(stream[:,0], stream[:,1], stream[:,2], alpha=0.1)<br>
>>> > ><br>
>>> > > Here, the 'stream' object is just a Nx3 numpy array, where N is the number<br>
>>> > > of points sampled along the streamline. So each row of the numpy array is<br>
>>> > > just the coordinates of the streamline along one direction.<br>
>>> > ><br>
>>> > > To answer your question, no, there's nothing in yt that will rotate the<br>
>>> > > streamlines into a new coordinate system. Fortunately you should be able to<br>
>>> > > do it yourself using e.g. an Euler angle rotation matrix. You will need to<br>
>>> > > identify the new coordinate system you would like to transform to,<br>
>>> > > calculate a 3D rotation matrix, then apply it using matrix multiplication<br>
>>> > > (e.g. np.dot, which supports broadcasting) to each coordinate along the<br>
>>> > > streamline.<br>
>>> > ><br>
>>> > > Hope that helps,<br>
>>> > ><br>
>>> > > Nathan<br>
>>> > ><br>
>>> > > On Thu, Mar 31, 2016 at 8:56 AM, Sushilkumar <<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>>>><br>
>>> > > wrote:<br>
>>> > ><br>
>>> > > > Dear Matt:<br>
>>> > > ><br>
>>> > > > Pleas correct me if I am wrong but "off axis slices" takes slices of the<br>
>>> > > > plot that is already plotted.<br>
>>> > > ><br>
>>> > > > However, I would like to plot my data in a new coordinate frame<br>
>>> > > (x`,y`,z`)<br>
>>> > > > which is inclined at an angle of say alpha from the default (x,y,z)<br>
>>> > > frame.<br>
>>> > > ><br>
>>> > > > Or I would like to plot my data in a rotated frame (x`,y`,z`), which is<br>
>>> > > > rotated at an angle of alpha from (x,y,z).<br>
>>> > > ><br>
>>> > > ><br>
>>> > > ><br>
>>> > > ><br>
>>> > > > On Wed, Mar 30, 2016 at 5:01 PM, <<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>>><br>
>>> > > > wrote:<br>
>>> > > ><br>
>>> > > >> Send yt-users mailing list submissions to<br>
>>> > > >>         <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >><br>
>>> > > >> To subscribe or unsubscribe via the World Wide Web, visit<br>
>>> > > >>         <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> or, via email, send a message with subject or body 'help' to<br>
>>> > > >>         <a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>><br>
>>> > > >><br>
>>> > > >> You can reach the person managing the list at<br>
>>> > > >>         <a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a>>><br>
>>> > > >><br>
>>> > > >> When replying, please edit your Subject line so it is more specific<br>
>>> > > >> than "Re: Contents of yt-users digest..."<br>
>>> > > >><br>
>>> > > >><br>
>>> > > >> Today's Topics:<br>
>>> > > >><br>
>>> > > >>    1. Re: load spherical polar coordinate data with mesh refinement<br>
>>> > > >>       in HDF5 (Jiang, Yanfei)<br>
>>> > > >>    2. Re: load spherical polar coordinate data with mesh refinement<br>
>>> > > >>       in HDF5 (Matthew Turk)<br>
>>> > > >>    3. Re: Inclination problem (Matthew Turk)<br>
>>> > > >>    4. Re: load spherical polar coordinate data with mesh refinement<br>
>>> > > >>       in HDF5 (Jonah Miller)<br>
>>> > > >><br>
>>> > > >><br>
>>> > > >> ----------------------------------------------------------------------<br>
>>> > > >><br>
>>> > > >> Message: 1<br>
>>> > > >> Date: Wed, 30 Mar 2016 15:49:26 -0400<br>
>>> > > >> From: "Jiang, Yanfei" <<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>>>><br>
>>> > > >> To: Discussion of the yt analysis package<br>
>>> > > >>         <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>>><br>
>>> > > >> Subject: Re: [yt-users] load spherical polar coordinate data with mesh<br>
>>> > > >>         refinement in HDF5<br>
>>> > > >> Message-ID:<br>
>>> > > >>         <<br>
>>> > > >> <a href="mailto:CANixPav-VmbXfhNvmA5wb5gj19mF%2B-Ryq5YD-LrYrByDe3Ne7A@mail.gmail.com">CANixPav-VmbXfhNvmA5wb5gj19mF+-Ryq5YD-LrYrByDe3Ne7A@mail.gmail.com</a> <mailto:<a href="mailto:CANixPav-VmbXfhNvmA5wb5gj19mF%252B-Ryq5YD-LrYrByDe3Ne7A@mail.gmail.com">CANixPav-VmbXfhNvmA5wb5gj19mF%2B-Ryq5YD-LrYrByDe3Ne7A@mail.gmail.com</a>> <mailto:<a href="mailto:CANixPav-VmbXfhNvmA5wb5gj19mF%252B-Ryq5YD-LrYrByDe3Ne7A@mail.gmail.com">CANixPav-VmbXfhNvmA5wb5gj19mF%2B-Ryq5YD-LrYrByDe3Ne7A@mail.gmail.com</a> <mailto:<a href="mailto:CANixPav-VmbXfhNvmA5wb5gj19mF%25252B-Ryq5YD-LrYrByDe3Ne7A@mail.gmail.com">CANixPav-VmbXfhNvmA5wb5gj19mF%252B-Ryq5YD-LrYrByDe3Ne7A@mail.gmail.com</a>>>><br>
>>> > > >> Content-Type: text/plain; charset="utf-8"<br>
>>> > > >><br>
>>> > > >> Hi Jonah,<br>
>>> > > >><br>
>>> > > >>    I am able to load the data to yt now using load_amr_grids(). I notice<br>
>>> > > >> that it can also set geometry to spherical. This is great. But to make<br>
>>> > > >> life<br>
>>> > > >> more complicate. Is it possible to let yt know that the grid is<br>
>>> > > >> logarithmic? Currently, load_amr_grids() just take left and right edges<br>
>>> > > of<br>
>>> > > >> each block. I guess yt assumes the grid is uniform between left and<br>
>>> > > right<br>
>>> > > >> edges. Is it possible to provide arrays of coordinate values for each<br>
>>> > > cell<br>
>>> > > >> in each block?<br>
>>> > > >><br>
>>> > > >> Thanks.<br>
>>> > > >><br>
>>> > > >> On Tue, Mar 29, 2016 at 6:58 PM, Jonah Miller <<br>
>>> > > >> <a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a>> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a>>>> wrote:<br>
>>> > > >><br>
>>> > > >> > Hi Yan-Feng,<br>
>>> > > >> ><br>
>>> > > >> > I haven't tried it, but I think there is functionality for this. You<br>
>>> > > can<br>
>>> > > >> > use the load_amr_grids() function which can load amr data in<br>
>>> > > Cartesian,<br>
>>> > > >> > spherical, or polar coordinates. Here's the documentation:<br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a>> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a>>><br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a>> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a>>><br>
>>> > > >> ><br>
>>> > > >> > Best,<br>
>>> > > >> > Jonah<br>
>>> > > >> ><br>
>>> > > >> > On Tue, Mar 29, 2016, 6:35 PM Jiang, Yanfei <<br>
>>> > > >> <a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>>>><br>
>>> > > >> > wrote:<br>
>>> > > >> ><br>
>>> > > >> >> Hi,<br>
>>> > > >> >>          I have some data from a new version of Athena simulations.<br>
>>> > > It<br>
>>> > > >> is<br>
>>> > > >> >> in spherical polar coordinate with mesh refinement written in HDF5.<br>
>>> > > The<br>
>>> > > >> >> data structure is similar to flash data but not the same. Does anyone<br>
>>> > > >> have<br>
>>> > > >> >> suggestions to load such data to yt directly?<br>
>>> > > >> >><br>
>>> > > >> >> Thank you.<br>
>>> > > >> >> --<br>
>>> > > >> >> Yan-Fei Jiang<br>
>>> > > >> >><br>
>>> > > >> >> Einstein Fellow<br>
>>> > > >> >> Harvard-Smithsonian Center for Astrophysics<br>
>>> > > >> >> 60 Garden Street, Cambridge MA USA 02138<br>
>>> > > >> >> _______________________________________________<br>
>>> > > >> >> yt-users mailing list<br>
>>> > > >> >> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >><br>
>>> > > >> ><br>
>>> > > >> > _______________________________________________<br>
>>> > > >> > yt-users mailing list<br>
>>> > > >> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >><br>
>>> > > >><br>
>>> > > >> --<br>
>>> > > >> Yan-Fei Jiang<br>
>>> > > >><br>
>>> > > >> Einstein Fellow<br>
>>> > > >> Harvard-Smithsonian Center for Astrophysics<br>
>>> > > >> 60 Garden Street, Cambridge MA USA 02138<br>
>>> > > >> -------------- next part --------------<br>
>>> > > >> An HTML attachment was scrubbed...<br>
>>> > > >> URL: <<br>
>>> > > >><br>
>>> > > <a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160330/aedc3b19/attachment-0001.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160330/aedc3b19/attachment-0001.htm</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160330/aedc3b19/attachment-0001.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160330/aedc3b19/attachment-0001.htm</a>><<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160330/aedc3b19/attachment-0001.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160330/aedc3b19/attachment-0001.htm</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160330/aedc3b19/attachment-0001.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160330/aedc3b19/attachment-0001.htm</a>>><br>
>>> > > >> ><br>
>>> > > >><br>
>>> > > >> ------------------------------<br>
>>> > > >><br>
>>> > > >> Message: 2<br>
>>> > > >> Date: Wed, 30 Mar 2016 16:15:30 -0500<br>
>>> > > >> From: Matthew Turk <<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>>>><br>
>>> > > >> To: Discussion of the yt analysis package<br>
>>> > > >>         <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>>><br>
>>> > > >> Subject: Re: [yt-users] load spherical polar coordinate data with mesh<br>
>>> > > >>         refinement in HDF5<br>
>>> > > >> Message-ID:<br>
>>> > > >>         <CALO3=<br>
>>> > > >> <a href="mailto:5F1-_9V5XHS4vF_eXvKoPerz3Zo20X8uPtcFjQSAQS1MA@mail.gmail.com">5F1-_9V5XHS4vF_eXvKoPerz3Zo20X8uPtcFjQSAQS1MA@mail.gmail.com</a> <mailto:<a href="mailto:5F1-_9V5XHS4vF_eXvKoPerz3Zo20X8uPtcFjQSAQS1MA@mail.gmail.com">5F1-_9V5XHS4vF_eXvKoPerz3Zo20X8uPtcFjQSAQS1MA@mail.gmail.com</a>> <mailto:<a href="mailto:5F1-_9V5XHS4vF_eXvKoPerz3Zo20X8uPtcFjQSAQS1MA@mail.gmail.com">5F1-_9V5XHS4vF_eXvKoPerz3Zo20X8uPtcFjQSAQS1MA@mail.gmail.com</a> <mailto:<a href="mailto:5F1-_9V5XHS4vF_eXvKoPerz3Zo20X8uPtcFjQSAQS1MA@mail.gmail.com">5F1-_9V5XHS4vF_eXvKoPerz3Zo20X8uPtcFjQSAQS1MA@mail.gmail.com</a>>>><br>
>>> > > >> Content-Type: text/plain; charset=UTF-8<br>
>>> > > >><br>
>>> > > >> Hi Yanfei,<br>
>>> > > >><br>
>>> > > >> This is possible -- but it will also slow some things down.  You can<br>
>>> > > >> use the load_hexahedral_mesh function, and there're examples of this.<br>
>>> > > >> This takes away some of the optimizations that regular grids can do,<br>
>>> > > >> but we're hoping to add them back in shortly.  Like the other<br>
>>> > > >> functions it too takes a geometry argument.<br>
>>> > > >><br>
>>> > > >> -Matt<br>
>>> > > >><br>
>>> > > >> On Wed, Mar 30, 2016 at 2:49 PM, Jiang, Yanfei<br>
>>> > > >> <<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>>>> wrote:<br>
>>> > > >> > Hi Jonah,<br>
>>> > > >> ><br>
>>> > > >> >    I am able to load the data to yt now using load_amr_grids(). I<br>
>>> > > notice<br>
>>> > > >> > that it can also set geometry to spherical. This is great. But to make<br>
>>> > > >> life<br>
>>> > > >> > more complicate. Is it possible to let yt know that the grid is<br>
>>> > > >> logarithmic?<br>
>>> > > >> > Currently, load_amr_grids() just take left and right edges of each<br>
>>> > > >> block. I<br>
>>> > > >> > guess yt assumes the grid is uniform between left and right edges. Is<br>
>>> > > it<br>
>>> > > >> > possible to provide arrays of coordinate values for each cell in each<br>
>>> > > >> block?<br>
>>> > > >> ><br>
>>> > > >> > Thanks.<br>
>>> > > >> ><br>
>>> > > >> > On Tue, Mar 29, 2016 at 6:58 PM, Jonah Miller<br>
>>> > > >> > <<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a>> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a>>>> wrote:<br>
>>> > > >> >><br>
>>> > > >> >> Hi Yan-Feng,<br>
>>> > > >> >><br>
>>> > > >> >> I haven't tried it, but I think there is functionality for this. You<br>
>>> > > >> can<br>
>>> > > >> >> use the load_amr_grids() function which can load amr data in<br>
>>> > > Cartesian,<br>
>>> > > >> >> spherical, or polar coordinates. Here's the documentation:<br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a>> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a>>><br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a>> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a>>><br>
>>> > > >> >><br>
>>> > > >> >> Best,<br>
>>> > > >> >> Jonah<br>
>>> > > >> >><br>
>>> > > >> >> On Tue, Mar 29, 2016, 6:35 PM Jiang, Yanfei <<br>
>>> > > >> <a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>>>><br>
>>> > > >> >> wrote:<br>
>>> > > >> >>><br>
>>> > > >> >>> Hi,<br>
>>> > > >> >>>          I have some data from a new version of Athena simulations.<br>
>>> > > >> It is<br>
>>> > > >> >>> in spherical polar coordinate with mesh refinement written in HDF5.<br>
>>> > > >> The data<br>
>>> > > >> >>> structure is similar to flash data but not the same. Does anyone<br>
>>> > > have<br>
>>> > > >> >>> suggestions to load such data to yt directly?<br>
>>> > > >> >>><br>
>>> > > >> >>> Thank you.<br>
>>> > > >> >>> --<br>
>>> > > >> >>> Yan-Fei Jiang<br>
>>> > > >> >>><br>
>>> > > >> >>> Einstein Fellow<br>
>>> > > >> >>> Harvard-Smithsonian Center for Astrophysics<br>
>>> > > >> >>> 60 Garden Street, Cambridge MA USA 02138<br>
>>> > > >> >>> _______________________________________________<br>
>>> > > >> >>> yt-users mailing list<br>
>>> > > >> >>> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >> >> _______________________________________________<br>
>>> > > >> >> yt-users mailing list<br>
>>> > > >> >> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >><br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >> > --<br>
>>> > > >> > Yan-Fei Jiang<br>
>>> > > >> ><br>
>>> > > >> > Einstein Fellow<br>
>>> > > >> > Harvard-Smithsonian Center for Astrophysics<br>
>>> > > >> > 60 Garden Street, Cambridge MA USA 02138<br>
>>> > > >> ><br>
>>> > > >> > _______________________________________________<br>
>>> > > >> > yt-users mailing list<br>
>>> > > >> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> ><br>
>>> > > >><br>
>>> > > >><br>
>>> > > >> ------------------------------<br>
>>> > > >><br>
>>> > > >> Message: 3<br>
>>> > > >> Date: Wed, 30 Mar 2016 16:16:22 -0500<br>
>>> > > >> From: Matthew Turk <<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>>>><br>
>>> > > >> To: Discussion of the yt analysis package<br>
>>> > > >>         <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>>><br>
>>> > > >> Subject: Re: [yt-users] Inclination problem<br>
>>> > > >> Message-ID:<br>
>>> > > >>         <CALO3=5HMB=<br>
>>> > > >> <a href="mailto:joejr6BBh%2BzdxkwGzJS2NPrkK9tvMJnbch5-7BgQ@mail.gmail.com">joejr6BBh+zdxkwGzJS2NPrkK9tvMJnbch5-7BgQ@mail.gmail.com</a> <mailto:<a href="mailto:joejr6BBh%252BzdxkwGzJS2NPrkK9tvMJnbch5-7BgQ@mail.gmail.com">joejr6BBh%2BzdxkwGzJS2NPrkK9tvMJnbch5-7BgQ@mail.gmail.com</a>><mailto:<a href="mailto:joejr6BBh%252BzdxkwGzJS2NPrkK9tvMJnbch5-7BgQ@mail.gmail.com">joejr6BBh%2BzdxkwGzJS2NPrkK9tvMJnbch5-7BgQ@mail.gmail.com</a> <mailto:<a href="mailto:joejr6BBh%25252BzdxkwGzJS2NPrkK9tvMJnbch5-7BgQ@mail.gmail.com">joejr6BBh%252BzdxkwGzJS2NPrkK9tvMJnbch5-7BgQ@mail.gmail.com</a>>>><br>
>>> > > >> Content-Type: text/plain; charset=UTF-8<br>
>>> > > >><br>
>>> > > >> Hi SK,<br>
>>> > > >><br>
>>> > > >> I'm not sure I totally understand, but if you have an inclination<br>
>>> > > >> angle you can use this directly in yt in the off axis slices and so<br>
>>> > > >> on.  They typically take a vector, but you should be able to convert<br>
>>> > > >> one to the other.<br>
>>> > > >><br>
>>> > > >> -Matt<br>
>>> > > >><br>
>>> > > >> On Tue, Mar 29, 2016 at 1:37 PM, Sushilkumar <<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>><mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a> <mailto:<a href="mailto:sushil.sush19us@gmail.com">sushil.sush19us@gmail.com</a>>><br>
>>> > > ><br>
>>> > > >> wrote:<br>
>>> > > >> > Dear yt:<br>
>>> > > >> ><br>
>>> > > >> > I am trying to numerically solve the region around a pulsar. Now since<br>
>>> > > >> > pulsar is an inclined rotator with inclination angle between rotation<br>
>>> > > >> axis<br>
>>> > > >> > and dipole axis I would like to include in my yt script.<br>
>>> > > >> ><br>
>>> > > >> > My original code written in FORTRAN incorporated this inclination but<br>
>>> > > >> how<br>
>>> > > >> > would I incorporate it into my visualization using yt without changing<br>
>>> > > >> my<br>
>>> > > >> > data.<br>
>>> > > >> ><br>
>>> > > >> > Could you suggest ways for the same?<br>
>>> > > >> ><br>
>>> > > >> > The google drive link to my script (streamline.py) and streamline plot<br>
>>> > > >> > (streamline_t000.png) is included<br>
>>> > > >> ><br>
>>> > > >> > <a href="https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc" rel="noreferrer" target="_blank">https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc</a> <<a href="https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc" rel="noreferrer" target="_blank">https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc</a>> <<a href="https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc" rel="noreferrer" target="_blank">https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc</a> <<a href="https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc" rel="noreferrer" target="_blank">https://drive.google.com/open?id=0B4g8shg4DL7oak5PLWVVdG5UMHc</a>>><br>
>>> > > >> ><br>
>>> > > >> > Thanks in advance<br>
>>> > > >> ><br>
>>> > > >> > On Tue, Mar 29, 2016 at 12:54 PM, <<br>
>>> > > <a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>><br>
>>> > > >> ><br>
>>> > > >> > wrote:<br>
>>> > > >> >><br>
>>> > > >> >> Send yt-users mailing list submissions to<br>
>>> > > >> >>         <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >><br>
>>> > > >> >> To subscribe or unsubscribe via the World Wide Web, visit<br>
>>> > > >> >><br>
>>> > > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >> or, via email, send a message with subject or body 'help' to<br>
>>> > > >> >>         <a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-request@lists.spacepope.org">yt-users-request@lists.spacepope.org</a>>><br>
>>> > > >> >><br>
>>> > > >> >> You can reach the person managing the list at<br>
>>> > > >> >>         <a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users-owner@lists.spacepope.org">yt-users-owner@lists.spacepope.org</a>>><br>
>>> > > >> >><br>
>>> > > >> >> When replying, please edit your Subject line so it is more specific<br>
>>> > > >> >> than "Re: Contents of yt-users digest..."<br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >> >> Today's Topics:<br>
>>> > > >> >><br>
>>> > > >> >>    1. Re: gadget onto unigrid (Carla Bernhardt)<br>
>>> > > >> >>    2. Re: gadget onto unigrid (Matthew Turk)<br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > ----------------------------------------------------------------------<br>
>>> > > >> >><br>
>>> > > >> >> Message: 1<br>
>>> > > >> >> Date: Tue, 29 Mar 2016 15:55:27 +0200<br>
>>> > > >> >> From: Carla Bernhardt <<a href="mailto:carla.j.bernhardt@gmail.com">carla.j.bernhardt@gmail.com</a> <mailto:<a href="mailto:carla.j.bernhardt@gmail.com">carla.j.bernhardt@gmail.com</a>> <mailto:<a href="mailto:carla.j.bernhardt@gmail.com">carla.j.bernhardt@gmail.com</a> <mailto:<a href="mailto:carla.j.bernhardt@gmail.com">carla.j.bernhardt@gmail.com</a>>>><br>
>>> > > >> >> To: Discussion of the yt analysis package<br>
>>> > > >> >>         <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>>><br>
>>> > > >> >> Subject: Re: [yt-users] gadget onto unigrid<br>
>>> > > >> >> Message-ID:<br>
>>> > > >> >><br>
>>> > > >> >> <CAFK0O=2vH24ViqeZ5QS3DY3uido0kEaF=<a href="mailto:UhyGS_beuiUMbw7Ag@mail.gmail.com">UhyGS_beuiUMbw7Ag@mail.gmail.com</a> <mailto:<a href="mailto:UhyGS_beuiUMbw7Ag@mail.gmail.com">UhyGS_beuiUMbw7Ag@mail.gmail.com</a>><mailto:<a href="mailto:UhyGS_beuiUMbw7Ag@mail.gmail.com">UhyGS_beuiUMbw7Ag@mail.gmail.com</a> <mailto:<a href="mailto:UhyGS_beuiUMbw7Ag@mail.gmail.com">UhyGS_beuiUMbw7Ag@mail.gmail.com</a>>>><br>
>>> > > >> >> Content-Type: text/plain; charset="utf-8"<br>
>>> > > >> >><br>
>>> > > >> >> Hi All,<br>
>>> > > >> >><br>
>>> > > >> >> A follow-up question: In using arbitrary_grid (but with enzo data),<br>
>>> > > how<br>
>>> > > >> >> does one then extract a field of an arbitrary_grid? I tried<br>
>>> > > >> >> arbgrid["density"] as I have done with a smoothed_covering_grid<br>
>>> > > object,<br>
>>> > > >> >> but<br>
>>> > > >> >> it does not work (here is the traceback <<br>
>>> > > <a href="http://pastebin.com/afgcgpp0" rel="noreferrer" target="_blank">http://pastebin.com/afgcgpp0</a> <<a href="http://pastebin.com/afgcgpp0" rel="noreferrer" target="_blank">http://pastebin.com/afgcgpp0</a>> <<a href="http://pastebin.com/afgcgpp0" rel="noreferrer" target="_blank">http://pastebin.com/afgcgpp0</a> <<a href="http://pastebin.com/afgcgpp0" rel="noreferrer" target="_blank">http://pastebin.com/afgcgpp0</a>>>><br>
>>> > > >> I<br>
>>> > > >> >> got).<br>
>>> > > >> >><br>
>>> > > >> >> Thanks,<br>
>>> > > >> >> Carla<br>
>>> > > >> >><br>
>>> > > >> >> 2016-02-23 17:21 GMT+01:00 Matthew Turk <<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>>>>:<br>
>>> > > >> >><br>
>>> > > >> >> > Hi Desika,<br>
>>> > > >> >> ><br>
>>> > > >> >> > Yup, this can be done reasonably easily using either the<br>
>>> > > >> >> > .arbitrary_grid object (which was designed for this) or the<br>
>>> > > interface<br>
>>> > > >> >> > to the arbitrary grid that's in the development version, which is<br>
>>> > > >> >> > ds.r[ ... ] where the ... is some combination of bounds and steps.<br>
>>> > > >> >> ><br>
>>> > > >> >> ><br>
>>> > > <a href="http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid</a> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid</a>> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid</a> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid</a>>><br>
>>> > > >> >> ><br>
>>> > > >> >> ><br>
>>> > > >> >> ><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data</a> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data</a>> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data</a> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data</a>>><br>
>>> > > >> >> ><br>
>>> > > >> >> > On Tue, Feb 23, 2016 at 10:18 AM, Desika Narayanan<br>
>>> > > >> >> > <<a href="mailto:desika.narayanan@gmail.com">desika.narayanan@gmail.com</a> <mailto:<a href="mailto:desika.narayanan@gmail.com">desika.narayanan@gmail.com</a>> <mailto:<a href="mailto:desika.narayanan@gmail.com">desika.narayanan@gmail.com</a> <mailto:<a href="mailto:desika.narayanan@gmail.com">desika.narayanan@gmail.com</a>>>> wrote:<br>
>>> > > >> >> > > Hi All,<br>
>>> > > >> >> > ><br>
>>> > > >> >> > > Is it possible to deposit the particles from a gadget data set<br>
>>> > > >> onto a<br>
>>> > > >> >> > > uniform grid in yt?  Or, could it be possible to trick the octree<br>
>>> > > >> >> > deposition<br>
>>> > > >> >> > > into doing it by forcing no refinements, but some sort of native<br>
>>> > > >> grid<br>
>>> > > >> >> > > resolution?<br>
>>> > > >> >> > ><br>
>>> > > >> >> > > thanks,<br>
>>> > > >> >> > > desika<br>
>>> > > >> >> > ><br>
>>> > > >> >> > ><br>
>>> > > >> >> > > _______________________________________________<br>
>>> > > >> >> > > yt-users mailing list<br>
>>> > > >> >> > > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> > > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >> > ><br>
>>> > > >> >> > _______________________________________________<br>
>>> > > >> >> > yt-users mailing list<br>
>>> > > >> >> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >> ><br>
>>> > > >> >> -------------- next part --------------<br>
>>> > > >> >> An HTML attachment was scrubbed...<br>
>>> > > >> >> URL:<br>
>>> > > >> >> <<br>
>>> > > >><br>
>>> > > <a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160329/e29a03a1/attachment.html" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160329/e29a03a1/attachment.html</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160329/e29a03a1/attachment.html" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160329/e29a03a1/attachment.html</a>><<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160329/e29a03a1/attachment.html" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160329/e29a03a1/attachment.html</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160329/e29a03a1/attachment.html" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160329/e29a03a1/attachment.html</a>>><br>
>>> > > >> ><br>
>>> > > >> >><br>
>>> > > >> >> ------------------------------<br>
>>> > > >> >><br>
>>> > > >> >> Message: 2<br>
>>> > > >> >> Date: Tue, 29 Mar 2016 08:57:08 -0500<br>
>>> > > >> >> From: Matthew Turk <<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>>>><br>
>>> > > >> >> To: Discussion of the yt analysis package<br>
>>> > > >> >>         <<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>>><br>
>>> > > >> >> Subject: Re: [yt-users] gadget onto unigrid<br>
>>> > > >> >> Message-ID:<br>
>>> > > >> >><br>
>>> > > >> >> <CALO3=5HR=zLHujWKgLpqwei_98vBOjpYvQ4m8nnUFR=<a href="mailto:P098utA@mail.gmail.com">P098utA@mail.gmail.com</a> <mailto:<a href="mailto:P098utA@mail.gmail.com">P098utA@mail.gmail.com</a>><mailto:<a href="mailto:P098utA@mail.gmail.com">P098utA@mail.gmail.com</a> <mailto:<a href="mailto:P098utA@mail.gmail.com">P098utA@mail.gmail.com</a>>>><br>
>>> > > >> >> Content-Type: text/plain; charset=UTF-8<br>
>>> > > >> >><br>
>>> > > >> >> Hi Carla,<br>
>>> > > >> >><br>
>>> > > >> >> This functionality was recently implemented and is in the development<br>
>>> > > >> >> version, but not yet in the stable.  We're hoping for a release very<br>
>>> > > >> >> shortly, but you can also try the dev version if you'd like!<br>
>>> > > >> >><br>
>>> > > >> >> -Matt<br>
>>> > > >> >><br>
>>> > > >> >> On Tue, Mar 29, 2016 at 8:55 AM, Carla Bernhardt<br>
>>> > > >> >> <<a href="mailto:carla.j.bernhardt@gmail.com">carla.j.bernhardt@gmail.com</a> <mailto:<a href="mailto:carla.j.bernhardt@gmail.com">carla.j.bernhardt@gmail.com</a>> <mailto:<a href="mailto:carla.j.bernhardt@gmail.com">carla.j.bernhardt@gmail.com</a> <mailto:<a href="mailto:carla.j.bernhardt@gmail.com">carla.j.bernhardt@gmail.com</a>>>> wrote:<br>
>>> > > >> >> > Hi All,<br>
>>> > > >> >> ><br>
>>> > > >> >> > A follow-up question: In using arbitrary_grid (but with enzo data),<br>
>>> > > >> how<br>
>>> > > >> >> > does<br>
>>> > > >> >> > one then extract a field of an arbitrary_grid? I tried<br>
>>> > > >> >> > arbgrid["density"] as<br>
>>> > > >> >> > I have done with a smoothed_covering_grid object, but it does not<br>
>>> > > >> work<br>
>>> > > >> >> > (here<br>
>>> > > >> >> > is the traceback I got).<br>
>>> > > >> >> ><br>
>>> > > >> >> > Thanks,<br>
>>> > > >> >> > Carla<br>
>>> > > >> >> ><br>
>>> > > >> >> > 2016-02-23 17:21 GMT+01:00 Matthew Turk <<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a> <mailto:<a href="mailto:matthewturk@gmail.com">matthewturk@gmail.com</a>>>>:<br>
>>> > > >> >> >><br>
>>> > > >> >> >> Hi Desika,<br>
>>> > > >> >> >><br>
>>> > > >> >> >> Yup, this can be done reasonably easily using either the<br>
>>> > > >> >> >> .arbitrary_grid object (which was designed for this) or the<br>
>>> > > >> interface<br>
>>> > > >> >> >> to the arbitrary grid that's in the development version, which is<br>
>>> > > >> >> >> ds.r[ ... ] where the ... is some combination of bounds and steps.<br>
>>> > > >> >> >><br>
>>> > > >> >> >><br>
>>> > > >> <a href="http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid</a> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid</a>> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid</a> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#arbitrary-grid</a>>><br>
>>> > > >> >> >><br>
>>> > > >> >> >><br>
>>> > > >> >> >><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data</a> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data</a>> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data</a> <<a href="http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data" rel="noreferrer" target="_blank">http://yt-project.org/docs/dev/analyzing/objects.html#slicing-syntax-for-selecting-data</a>>><br>
>>> > > >> >> >><br>
>>> > > >> >> >> On Tue, Feb 23, 2016 at 10:18 AM, Desika Narayanan<br>
>>> > > >> >> >> <<a href="mailto:desika.narayanan@gmail.com">desika.narayanan@gmail.com</a> <mailto:<a href="mailto:desika.narayanan@gmail.com">desika.narayanan@gmail.com</a>> <mailto:<a href="mailto:desika.narayanan@gmail.com">desika.narayanan@gmail.com</a> <mailto:<a href="mailto:desika.narayanan@gmail.com">desika.narayanan@gmail.com</a>>>> wrote:<br>
>>> > > >> >> >> > Hi All,<br>
>>> > > >> >> >> ><br>
>>> > > >> >> >> > Is it possible to deposit the particles from a gadget data set<br>
>>> > > >> onto a<br>
>>> > > >> >> >> > uniform grid in yt?  Or, could it be possible to trick the<br>
>>> > > octree<br>
>>> > > >> >> >> > deposition<br>
>>> > > >> >> >> > into doing it by forcing no refinements, but some sort of native<br>
>>> > > >> grid<br>
>>> > > >> >> >> > resolution?<br>
>>> > > >> >> >> ><br>
>>> > > >> >> >> > thanks,<br>
>>> > > >> >> >> > desika<br>
>>> > > >> >> >> ><br>
>>> > > >> >> >> ><br>
>>> > > >> >> >> > _______________________________________________<br>
>>> > > >> >> >> > yt-users mailing list<br>
>>> > > >> >> >> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> >> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >> >> ><br>
>>> > > >> >> >> _______________________________________________<br>
>>> > > >> >> >> yt-users mailing list<br>
>>> > > >> >> >> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> >> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >> ><br>
>>> > > >> >> ><br>
>>> > > >> >> ><br>
>>> > > >> >> > _______________________________________________<br>
>>> > > >> >> > yt-users mailing list<br>
>>> > > >> >> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >> ><br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >> >> ------------------------------<br>
>>> > > >> >><br>
>>> > > >> >> Subject: Digest Footer<br>
>>> > > >> >><br>
>>> > > >> >> _______________________________________________<br>
>>> > > >> >> yt-users mailing list<br>
>>> > > >> >> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >> >> ------------------------------<br>
>>> > > >> >><br>
>>> > > >> >> End of yt-users Digest, Vol 97, Issue 34<br>
>>> > > >> >> ****************************************<br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >> > --<br>
>>> > > >> > SK2<br>
>>> > > >> ><br>
>>> > > >> > "Claiming that something can move faster than light is a good<br>
>>> > > >> > conversation-stopper in physics. People edge away from you in cocktail<br>
>>> > > >> > parties; friends never return phone calls. You just don?t mess with<br>
>>> > > >> Albert<br>
>>> > > >> > Einstein."<br>
>>> > > >> ><br>
>>> > > >> ><br>
>>> > > >> > _______________________________________________<br>
>>> > > >> > yt-users mailing list<br>
>>> > > >> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> ><br>
>>> > > >><br>
>>> > > >><br>
>>> > > >> ------------------------------<br>
>>> > > >><br>
>>> > > >> Message: 4<br>
>>> > > >> Date: Wed, 30 Mar 2016 18:01:04 -0400<br>
>>> > > >> From: Jonah Miller <<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a>> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a>>>><br>
>>> > > >> To: <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> Subject: Re: [yt-users] load spherical polar coordinate data with mesh<br>
>>> > > >>         refinement in HDF5<br>
>>> > > >> Message-ID: <<a href="mailto:56FC4CA0.4030403@gmail.com">56FC4CA0.4030403@gmail.com</a> <mailto:<a href="mailto:56FC4CA0.4030403@gmail.com">56FC4CA0.4030403@gmail.com</a>> <mailto:<a href="mailto:56FC4CA0.4030403@gmail.com">56FC4CA0.4030403@gmail.com</a> <mailto:<a href="mailto:56FC4CA0.4030403@gmail.com">56FC4CA0.4030403@gmail.com</a>>>><br>
>>> > > >> Content-Type: text/plain; charset=windows-1252; format=flowed<br>
>>> > > >><br>
>>> > > >> Hi Yanfei,<br>
>>> > > >><br>
>>> > > >> To add to Matt's comment. Here is the documentation for using<br>
>>> > > >> load_hexahedral_mesh.<br>
>>> > > >><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/doc/examining/loading_data.html#semi-structured-grid-data" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/loading_data.html#semi-structured-grid-data</a> <<a href="http://yt-project.org/doc/examining/loading_data.html#semi-structured-grid-data" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/loading_data.html#semi-structured-grid-data</a>> <<a href="http://yt-project.org/doc/examining/loading_data.html#semi-structured-grid-data" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/loading_data.html#semi-structured-grid-data</a> <<a href="http://yt-project.org/doc/examining/loading_data.html#semi-structured-grid-data" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/loading_data.html#semi-structured-grid-data</a>>><br>
>>> > > >><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_hexahedral_mesh.html" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_hexahedral_mesh.html</a> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_hexahedral_mesh.html" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_hexahedral_mesh.html</a>><<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_hexahedral_mesh.html" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_hexahedral_mesh.html</a> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_hexahedral_mesh.html" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_hexahedral_mesh.html</a>>><br>
>>> > > >><br>
>>> > > >> Best,<br>
>>> > > >> Jonah<br>
>>> > > >><br>
>>> > > >> On 16-03-30 05:15 PM, Matthew Turk wrote:<br>
>>> > > >> > Hi Yanfei,<br>
>>> > > >> ><br>
>>> > > >> > This is possible -- but it will also slow some things down.  You can<br>
>>> > > >> > use the load_hexahedral_mesh function, and there're examples of this.<br>
>>> > > >> > This takes away some of the optimizations that regular grids can do,<br>
>>> > > >> > but we're hoping to add them back in shortly.  Like the other<br>
>>> > > >> > functions it too takes a geometry argument.<br>
>>> > > >> ><br>
>>> > > >> > -Matt<br>
>>> > > >> ><br>
>>> > > >> > On Wed, Mar 30, 2016 at 2:49 PM, Jiang, Yanfei<br>
>>> > > >> > <<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>>>> wrote:<br>
>>> > > >> >> Hi Jonah,<br>
>>> > > >> >><br>
>>> > > >> >>     I am able to load the data to yt now using load_amr_grids(). I<br>
>>> > > >> notice<br>
>>> > > >> >> that it can also set geometry to spherical. This is great. But to<br>
>>> > > make<br>
>>> > > >> life<br>
>>> > > >> >> more complicate. Is it possible to let yt know that the grid is<br>
>>> > > >> logarithmic?<br>
>>> > > >> >> Currently, load_amr_grids() just take left and right edges of each<br>
>>> > > >> block. I<br>
>>> > > >> >> guess yt assumes the grid is uniform between left and right edges. Is<br>
>>> > > >> it<br>
>>> > > >> >> possible to provide arrays of coordinate values for each cell in each<br>
>>> > > >> block?<br>
>>> > > >> >><br>
>>> > > >> >> Thanks.<br>
>>> > > >> >><br>
>>> > > >> >> On Tue, Mar 29, 2016 at 6:58 PM, Jonah Miller<br>
>>> > > >> >> <<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a>> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a> <mailto:<a href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a>>>> wrote:<br>
>>> > > >> >>> Hi Yan-Feng,<br>
>>> > > >> >>><br>
>>> > > >> >>> I haven't tried it, but I think there is functionality for this. You<br>
>>> > > >> can<br>
>>> > > >> >>> use the load_amr_grids() function which can load amr data in<br>
>>> > > >> Cartesian,<br>
>>> > > >> >>> spherical, or polar coordinates. Here's the documentation:<br>
>>> > > >> >>><br>
>>> > > >> >>><br>
>>> > > >> >>><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a>> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a> <<a href="http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array" rel="noreferrer" target="_blank">http://yt-project.org/doc/examining/generic_array_data.html#loading-numpy-array</a>>><br>
>>> > > >> >>><br>
>>> > > >> >>><br>
>>> > > >> >>><br>
>>> > > >><br>
>>> > > <a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a>> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a> <<a href="http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids" rel="noreferrer" target="_blank">http://yt-project.org/doc/reference/api/generated/yt.frontends.stream.data_structures.load_amr_grids.html#yt.frontends.stream.data_structures.load_amr_grids</a>>><br>
>>> > > >> >>><br>
>>> > > >> >>> Best,<br>
>>> > > >> >>> Jonah<br>
>>> > > >> >>><br>
>>> > > >> >>> On Tue, Mar 29, 2016, 6:35 PM Jiang, Yanfei <<br>
>>> > > >> <a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a> <mailto:<a href="mailto:yanfei.jiang@cfa.harvard.edu">yanfei.jiang@cfa.harvard.edu</a>>>><br>
>>> > > >> >>> wrote:<br>
>>> > > >> >>>> Hi,<br>
>>> > > >> >>>>           I have some data from a new version of Athena<br>
>>> > > simulations.<br>
>>> > > >> It is<br>
>>> > > >> >>>> in spherical polar coordinate with mesh refinement written in HDF5.<br>
>>> > > >> The data<br>
>>> > > >> >>>> structure is similar to flash data but not the same. Does anyone<br>
>>> > > have<br>
>>> > > >> >>>> suggestions to load such data to yt directly?<br>
>>> > > >> >>>><br>
>>> > > >> >>>> Thank you.<br>
>>> > > >> >>>> --<br>
>>> > > >> >>>> Yan-Fei Jiang<br>
>>> > > >> >>>><br>
>>> > > >> >>>> Einstein Fellow<br>
>>> > > >> >>>> Harvard-Smithsonian Center for Astrophysics<br>
>>> > > >> >>>> 60 Garden Street, Cambridge MA USA 02138<br>
>>> > > >> >>>> _______________________________________________<br>
>>> > > >> >>>> yt-users mailing list<br>
>>> > > >> >>>> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >>>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >>><br>
>>> > > >> >>> _______________________________________________<br>
>>> > > >> >>> yt-users mailing list<br>
>>> > > >> >>> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >>><br>
>>> > > >> >><br>
>>> > > >> >><br>
>>> > > >> >> --<br>
>>> > > >> >> Yan-Fei Jiang<br>
>>> > > >> >><br>
>>> > > >> >> Einstein Fellow<br>
>>> > > >> >> Harvard-Smithsonian Center for Astrophysics<br>
>>> > > >> >> 60 Garden Street, Cambridge MA USA 02138<br>
>>> > > >> >><br>
>>> > > >> >> _______________________________________________<br>
>>> > > >> >> yt-users mailing list<br>
>>> > > >> >> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> >> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >> >><br>
>>> > > >> > _______________________________________________<br>
>>> > > >> > yt-users mailing list<br>
>>> > > >> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >><br>
>>> > > >><br>
>>> > > >><br>
>>> > > >> ------------------------------<br>
>>> > > >><br>
>>> > > >> Subject: Digest Footer<br>
>>> > > >><br>
>>> > > >> _______________________________________________<br>
>>> > > >> yt-users mailing list<br>
>>> > > >> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > >> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > >><br>
>>> > > >><br>
>>> > > >> ------------------------------<br>
>>> > > >><br>
>>> > > >> End of yt-users Digest, Vol 97, Issue 37<br>
>>> > > >> ****************************************<br>
>>> > > >><br>
>>> > > ><br>
>>> > > ><br>
>>> > > ><br>
>>> > > > --<br>
>>> > > > *SK2*<br>
>>> > > ><br>
>>> > > > *"**Claiming that something can move faster than light is a good<br>
>>> > > > conversation-stopper in physics. People edge away from you in cocktail<br>
>>> > > > parties; friends never return phone calls. You just don?t mess with<br>
>>> > > Albert<br>
>>> > > > Einstein.**"*<br>
>>> > > ><br>
>>> > > ><br>
>>> > > > _______________________________________________<br>
>>> > > > yt-users mailing list<br>
>>> > > > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > > ><br>
>>> > > ><br>
>>> > > -------------- next part --------------<br>
>>> > > An HTML attachment was scrubbed...<br>
>>> > > URL: <<br>
>>> > > <a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/b739cfe9/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/b739cfe9/attachment.htm</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/b739cfe9/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/b739cfe9/attachment.htm</a>><<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/b739cfe9/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/b739cfe9/attachment.htm</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/b739cfe9/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/b739cfe9/attachment.htm</a>>><br>
>>> > > ><br>
>>> > ><br>
>>> > > ------------------------------<br>
>>> > ><br>
>>> > > Subject: Digest Footer<br>
>>> > ><br>
>>> > > _______________________________________________<br>
>>> > > yt-users mailing list<br>
>>> > > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> > ><br>
>>> > ><br>
>>> > > ------------------------------<br>
>>> > ><br>
>>> > > End of yt-users Digest, Vol 97, Issue 39<br>
>>> > > ****************************************<br>
>>> > ><br>
>>> ><br>
>>> ><br>
>>> ><br>
>>> > --<br>
>>> > *SK2*<br>
>>> ><br>
>>> > *"**Claiming that something can move faster than light is a good<br>
>>> > conversation-stopper in physics. People edge away from you in cocktail<br>
>>> > parties; friends never return phone calls. You just don?t mess with Albert<br>
>>> > Einstein.**"*<br>
>>> > -------------- next part --------------<br>
>>> > An HTML attachment was scrubbed...<br>
>>> > URL: <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/f4f56e5d/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/f4f56e5d/attachment.htm</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/f4f56e5d/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/f4f56e5d/attachment.htm</a>><<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/f4f56e5d/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/f4f56e5d/attachment.htm</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/f4f56e5d/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160331/f4f56e5d/attachment.htm</a>>>><br>
>>> ><br>
>>> > ------------------------------<br>
>>> ><br>
>>> > Subject: Digest Footer<br>
>>> ><br>
>>> > _______________________________________________<br>
>>> > yt-users mailing list<br>
>>> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>>><br>
>>> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>>><br>
>>> ><br>
>>> ><br>
>>> > ------------------------------<br>
>>> ><br>
>>> > End of yt-users Digest, Vol 97, Issue 41<br>
>>> > ****************************************<br>
>>> ><br>
>>> ><br>
>>> ><br>
>>> > --<br>
>>> > SK2<br>
>>> ><br>
>>> > "Claiming that something can move faster than light is a good conversation-stopper in physics. People edge away from you in cocktail parties; friends never return phone calls. You just don?t mess with Albert Einstein."<br>
>>> ><br>
>>> > _______________________________________________<br>
>>> > yt-users mailing list<br>
>>> > <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>><br>
>>> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>><br>
>>><br>
>>> -------------- next part --------------<br>
>>> An HTML attachment was scrubbed...<br>
>>> URL: <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160415/0ccad489/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160415/0ccad489/attachment.htm</a> <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160415/0ccad489/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160415/0ccad489/attachment.htm</a>>><br>
>>><br>
>>> ------------------------------<br>
>>><br>
>>> Subject: Digest Footer<br>
>>><br>
>>> _______________________________________________<br>
>>> yt-users mailing list<br>
>>> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>><br>
>>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>><br>
>>><br>
>>><br>
>>> ------------------------------<br>
>>><br>
>>> End of yt-users Digest, Vol 98, Issue 14<br>
>>> ****************************************<br>
>>><br>
>>><br>
>>><br>
>>> --<br>
>>> SK2<br>
>>><br>
>>> "Claiming that something can move faster than light is a good conversation-stopper in physics. People edge away from you in cocktail parties; friends never return phone calls. You just don?t mess with Albert Einstein."<br>
>>><br>
>>><br>
>>><br>
>>><br>
>>> --<br>
>>> SK2<br>
>>><br>
>>> "Claiming that something can move faster than light is a good conversation-stopper in physics. People edge away from you in cocktail parties; friends never return phone calls. You just don?t mess with Albert Einstein."<br>
>>><br>
>>> _______________________________________________<br>
>>> yt-users mailing list<br>
>>> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>><br>
>>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>><br>
>><br>
>><br>
>> _______________________________________________<br>
>> yt-users mailing list<br>
>> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>><br>
>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>><br>
>><br>
>><br>
>> _______________________________________________<br>
>> yt-users mailing list<br>
>> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>><br>
>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>><br>
><br>
><br>
> _______________________________________________<br>
> yt-users mailing list<br>
> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>><br>
> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>><br>
><br>
><br>
> _______________________________________________<br>
> yt-users mailing list<br>
> <a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a> <mailto:<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>><br>
> <a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a> <<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>><br>
-------------- next part --------------<br>
An HTML attachment was scrubbed...<br>
URL: <<a href="http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160421/5f07255c/attachment.htm" rel="noreferrer" target="_blank">http://lists.spacepope.org/pipermail/yt-users-spacepope.org/attachments/20160421/5f07255c/attachment.htm</a>><br>
<br>
------------------------------<br>
<br>
Subject: Digest Footer<br>
<br>
_______________________________________________<br>
yt-users mailing list<br>
<a href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a><br>
<a href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a><br>
<br>
<br>
------------------------------<br>
<br>
End of yt-users Digest, Vol 98, Issue 27<br>
****************************************<br>
</blockquote></div><br><br clear="all"><br>-- <br><div class="gmail_signature"><span style="border-collapse:collapse"><div style="color:rgb(80,0,80);font-family:arial,sans-serif;font-size:13px"><span style="font-family:arial,sans-serif;font-size:13px;border-collapse:collapse"><b><i>SK²</i></b></span></div><div style="color:rgb(80,0,80);font-family:arial,sans-serif;font-size:13px"><span style="font-family:arial,sans-serif;font-size:13px;border-collapse:collapse"><b><i>^<br></i></b></span></div><div><span style="color:rgb(80,0,80);font-family:arial,sans-serif;border-collapse:collapse"><b>^"</b></span><font face="arial, sans-serif" color="#500050"><b>Claiming that something can move faster than light is a good conversation-stopper in physics. People edge away from you in cocktail parties; friends never return phone calls. You just don’t mess with Albert Einstein.</b></font><b style="color:rgb(80,0,80);font-family:arial,sans-serif">^"</b></div><div style="color:rgb(80,0,80);font-family:arial,sans-serif;font-size:13px"><br></div></span></div>
</div></div></div></div></div></div></div></div>