<div dir="ltr">Hi Daniel,<div><br></div><div>Could you try running <a href="http://paste.yt-project.org/show/5902/">this</a> python script using the same python you're trying to install yt with? Does it give you some output, or does it fail with the same error message? </div><div><br></div><div>Thanks,</div><div>Andrew</div></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Sep 24, 2015 at 12:05 PM, Andrew Myers <span dir="ltr"><<a href="mailto:atmyers2@gmail.com" target="_blank">atmyers2@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hello yt users,<div><br></div><div>I'm working with Daniel Schwen of the MOOSE team to install yt from source. He is running OS X Yosemite, and trying to install yt over a miniconda python. After cloning my yt repository, the install script fails with the attached traceback. Does anyone have any ideas?</div><div><br></div><div>Thanks,</div><div>Andrew</div><div><br></div><blockquote style="margin:0px 0px 0px 40px;border:none;padding:0px"><div><span style="color:rgb(80,0,80);font-size:12.8px">[10][schwd][~/Downloads/yt-hg]</span><span style="color:rgb(80,0,80);font-size:12.8px">> CFLAGS="-I/opt/local/include"</span><br></div><div><span style="font-size:12.8px">LDFLAGS="-L/opt/local/lib" python setup.py develop</span></div><div><span style="font-size:12.8px">/opt/moose/miniconda/lib/python2.7/site-packages/setuptools-18.3.2-py2.7.egg/setuptools/dist.py:285:</span></div><div><span style="font-size:12.8px">UserWarning: Normalizing '3.3-dev' to '3.3.dev0'</span></div><div><span style="font-size:12.8px">non-existing path in 'yt/utilities/spatial': 'yt/utilities/spatial/tests'</span></div><div><span style="font-size:12.8px"><span style="font-size:12.8px">Traceback (most recent call last):</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "setup.py", line 227, in <module></span><br style="font-size:12.8px"><span style="font-size:12.8px">    setup_package()</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "setup.py", line 222, in setup_package</span><br style="font-size:12.8px"><span style="font-size:12.8px">    cmdclass={'build_py': my_build_py, 'build_src': my_build_src},</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/core.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 135, in setup</span><br style="font-size:12.8px"><span style="font-size:12.8px">    config = configuration()</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "setup.py", line 178, in configuration</span><br style="font-size:12.8px"><span style="font-size:12.8px">    config.add_subpackage('yt', 'yt')</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 966, in add_subpackage</span><br style="font-size:12.8px"><span style="font-size:12.8px">    caller_level = 2)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 935, in get_subpackage</span><br style="font-size:12.8px"><span style="font-size:12.8px">    caller_level = caller_level + 1)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 872, in _get_configuration_from_setup_</span><span style="font-size:12.8px">py</span><br style="font-size:12.8px"><span style="font-size:12.8px">    config = setup_module.configuration(*</span><span style="font-size:12.8px">args)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "yt/setup.py", line 18, in configuration</span><br style="font-size:12.8px"><span style="font-size:12.8px">    config.add_subpackage('</span><span style="font-size:12.8px">utilities')</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 966, in add_subpackage</span><br style="font-size:12.8px"><span style="font-size:12.8px">    caller_level = 2)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 935, in get_subpackage</span><br style="font-size:12.8px"><span style="font-size:12.8px">    caller_level = caller_level + 1)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 872, in _get_configuration_from_setup_</span><span style="font-size:12.8px">py</span><br style="font-size:12.8px"><span style="font-size:12.8px">    config = setup_module.configuration(*</span><span style="font-size:12.8px">args)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "yt/utilities/setup.py", line 161, in configuration</span><br style="font-size:12.8px"><span style="font-size:12.8px">    config.add_subpackage("lib")</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 966, in add_subpackage</span><br style="font-size:12.8px"><span style="font-size:12.8px">    caller_level = 2)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 935, in get_subpackage</span><br style="font-size:12.8px"><span style="font-size:12.8px">    caller_level = caller_level + 1)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/site-packages/numpy/</span><span style="font-size:12.8px">distutils/misc_util.py",</span><br style="font-size:12.8px"><span style="font-size:12.8px">line 872, in _get_configuration_from_setup_</span><span style="font-size:12.8px">py</span><br style="font-size:12.8px"><span style="font-size:12.8px">    config = setup_module.configuration(*</span><span style="font-size:12.8px">args)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "yt/utilities/lib/setup.py", line 57, in configuration</span><br style="font-size:12.8px"><span style="font-size:12.8px">    if check_for_openmp() == True:</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "yt/utilities/lib/setup.py", line 37, in check_for_openmp</span><br style="font-size:12.8px"><span style="font-size:12.8px">    stdout=fnull, stderr=fnull)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/subprocess.py", line 522, in call</span><br style="font-size:12.8px"><span style="font-size:12.8px">    return Popen(*popenargs, **kwargs).wait()</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/subprocess.py", line 710, in __init__</span><br style="font-size:12.8px"><span style="font-size:12.8px">    errread, errwrite)</span><br style="font-size:12.8px"><span style="font-size:12.8px">  File "/opt/moose/miniconda/lib/</span><span style="font-size:12.8px">python2.7/subprocess.py", line 1335,</span><br style="font-size:12.8px"><span style="font-size:12.8px">in _execute_child</span><br style="font-size:12.8px"><span style="font-size:12.8px">    raise child_exception</span><br style="font-size:12.8px"><span style="font-size:12.8px">OSError: [Errno 2] No such file or directory</span><br></span></div></blockquote></div>
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