<html>
  <head>
    <meta content="text/html; charset=windows-1252"
      http-equiv="Content-Type">
  </head>
  <body text="#000000" bgcolor="#FFFFFF">
    Hi Matt,<br>
    <br>
    Yes, I've uploaded a tarball with a dataset and my preliminary
    attempts to stitch it together (in an ipython notebook). It also
    includes a graph showing the connectivity.<br>
    <br>
    Here's the file: <a class="moz-txt-link-freetext" href="http://use.yt/upload/d4218c8d">http://use.yt/upload/d4218c8d</a><br>
    <br>
    Thanks for your help!<br>
    <br>
    Best,<br>
    Jonah<br>
    <br>
    <div class="moz-cite-prefix">On 15-08-30 04:11 PM, Matthew Turk
      wrote:<br>
    </div>
    <blockquote
cite="mid:CALO3=5ELBGSuqoxkNTQDp4O374YChbgBTQDWJwx=LHBMaifKyg@mail.gmail.com"
      type="cite">
      <div dir="ltr">Hi Jonah,
        <div><br>
        </div>
        <div>Sorry, I should have been more explicit.  If we regard the
          dataset as "AMR" where the "AMR" is all on the same level,
          cells should be able to be overlapped.  Can you provide an
          example set of connectivity, even with fake values, that could
          be experimented with?</div>
      </div>
      <div class="gmail_extra"><br>
        <div class="gmail_quote">On Fri, Aug 21, 2015 at 10:47 PM, Jonah
          Miller <span dir="ltr"><<a moz-do-not-send="true"
              href="mailto:jonah.maxwell.miller@gmail.com"
              target="_blank">jonah.maxwell.miller@gmail.com</a>></span>
          wrote:<br>
          <blockquote class="gmail_quote" style="margin:0 0 0
            .8ex;border-left:1px #ccc solid;padding-left:1ex">
            <div bgcolor="#FFFFFF" text="#000000"> Hi Matt,<br>
              <br>
              The data can certainly be arranged so that there's either
              full overlap or no overlap between the datasets. But I'm
              not sure what you mean by dynamic/computed masking.<br>
              <br>
              Best,<br>
              Jonah
              <div>
                <div class="h5"><br>
                  <br>
                  <div>On 15-08-21 10:59 PM, Matthew Turk wrote:<br>
                  </div>
                  <blockquote type="cite">Hi Jonah,
                    <div><br>
                    </div>
                    <div>I've been thinking about this, and I wonder if
                      it's possible to identify which sections overlap. 
                      Is there partial overlap between two given cells,
                      or do cells either overlap or *not* overlap?  If
                      there's only full overlap in cells (i.e., a cell
                      in one section totally overlaps with a cell in a
                      different section) then I think we can do dynamic
                      or computed masking and create a single unified
                      dataset.  Does that make sense?</div>
                    <div><br>
                    </div>
                    <div>-Matt<br>
                      <br>
                      On Thursday, August 20, 2015, Jonah Miller <<a
                        moz-do-not-send="true"
                        href="mailto:jonah.maxwell.miller@gmail.com"
                        target="_blank"><a class="moz-txt-link-abbreviated" href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a></a>>

                      wrote:<br>
                      <blockquote class="gmail_quote" style="margin:0 0
                        0 .8ex;border-left:1px #ccc
                        solid;padding-left:1ex">
                        <div text="#000000" bgcolor="#FFFFFF"> Hi Matt,<br>
                          <br>
                          Thanks for the reply. The datasets are a six
                          patches coordinate system. I've attached some
                          images of the six data sets, and how they
                          should stitch together. From that, it would be
                          nice to be able to do analysis on them---i.e.,
                          make an arbitrary slice plot. <br>
                          <br>
                          It's straightforward to stitch <i>four of</i>
                          the actual arrays together and leave out the
                          top and bottom patches. The problem is getting
                          all six to work together.<br>
                          <br>
                          Best,<br>
                          Jonah<br>
                          <br>
                          <div>On 15-08-20 09:21 AM, Matthew Turk wrote:<br>
                          </div>
                          <blockquote type="cite">
                            <div dir="ltr">Hi Jonah,
                              <div><br>
                              </div>
                              <div>Right now, I think this would be
                                tricky.  I'm trying to figure out
                                precisely how it could be done without
                                compositing the datasets themselves, and
                                I'm not sure it's terribly feasible at
                                the time being without some trickery. 
                                One possibility, since the data is
                                spherical, is to get fixed res buffers
                                for each section of the plot you want,
                                then utilize matplotlib to stitch those
                                together into a single plot.  It might
                                help if you had a little sketch so that
                                your desired outcome could be a bit more
                                visual?</div>
                              <div><br>
                              </div>
                              <div>-Matt</div>
                            </div>
                            <div class="gmail_extra"><br>
                              <div class="gmail_quote">On Wed, Aug 19,
                                2015 at 2:31 PM, Jonah Miller <span
                                  dir="ltr"><<a
                                    moz-do-not-send="true"><a class="moz-txt-link-abbreviated" href="mailto:jonah.maxwell.miller@gmail.com">jonah.maxwell.miller@gmail.com</a></a>></span>
                                wrote:<br>
                                <blockquote class="gmail_quote"
                                  style="margin:0 0 0
                                  .8ex;border-left:1px #ccc
                                  solid;padding-left:1ex">Hi Everyone,<br>
                                  <br>
                                  I have data for a simulation in
                                  spherical coordinates that I wish to
                                  input into yt and visualize using the
                                  generic reader tools. However, the
                                  simulation is broken up into six
                                  volumes, each of which is a solid
                                  angle that makes up part of a sphere.
                                  Unfortunately, stitching together the
                                  arrays of data produces a lot of
                                  redundancies, there's no easy way to
                                  include all of it in a single array
                                  without including the same data points
                                  several times. So what I'd like is a
                                  way to feed in each solid angle as an
                                  individual data set, but visualize all
                                  six datasets on a single plot. Is this
                                  possible?<br>
                                  <br>
                                  Thanks in advance for your help!<br>
                                  <br>
                                  Best,<br>
                                  Jonah MIller<br>
_______________________________________________<br>
                                  yt-users mailing list<br>
                                  <a moz-do-not-send="true">yt-users@lists.spacepope.org</a><br>
                                  <a moz-do-not-send="true"
                                    href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org"
                                    rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a><br>
                                </blockquote>
                              </div>
                              <br>
                            </div>
                            <br>
                            <fieldset></fieldset>
                            <br>
                            <pre>_______________________________________________
yt-users mailing list
<a moz-do-not-send="true">yt-users@lists.spacepope.org</a>
<a moz-do-not-send="true" href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>
</pre>
                          </blockquote>
                          <br>
                        </div>
                      </blockquote>
                    </div>
                    <br>
                    <fieldset></fieldset>
                    <br>
                    <pre>_______________________________________________
yt-users mailing list
<a moz-do-not-send="true" href="mailto:yt-users@lists.spacepope.org" target="_blank">yt-users@lists.spacepope.org</a>
<a moz-do-not-send="true" href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>
</pre>
                  </blockquote>
                  <br>
                </div>
              </div>
            </div>
            <br>
            _______________________________________________<br>
            yt-users mailing list<br>
            <a moz-do-not-send="true"
              href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a><br>
            <a moz-do-not-send="true"
              href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org"
              rel="noreferrer" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a><br>
            <br>
          </blockquote>
        </div>
        <br>
      </div>
      <br>
      <fieldset class="mimeAttachmentHeader"></fieldset>
      <br>
      <pre wrap="">_______________________________________________
yt-users mailing list
<a class="moz-txt-link-abbreviated" href="mailto:yt-users@lists.spacepope.org">yt-users@lists.spacepope.org</a>
<a class="moz-txt-link-freetext" href="http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org">http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org</a>
</pre>
    </blockquote>
    <br>
  </body>
</html>