<html><head><meta http-equiv="content-type" content="text/html; charset=utf-8"></head><body dir="auto"><div>Hi yt'ers,</div><div><br></div><div>Ivo Seitenzahl, a fellow FLASHer and former UChicago colleague, is having trouble with the install script on a HPC system. His issue is copied below. </div><div><br></div><div>It keeps picking up the Intel compilers, even though he specifies the GNU compiler modules to be loaded. At the moment, I've suggested he set CC=gcc and CXX=g++, but I thought I would copy over here to see if anyone else has any ideas.</div><div><br></div><div>Best,</div><div><br></div><div>John</div><div><br></div><blockquote type="cite"><div><b>From:</b> Ivo Seitenzahl <<a href="mailto:ivo.seitenzahl@anu.edu.au">ivo.seitenzahl@anu.edu.au</a>><br><b>Date:</b> November 23, 2014 at 10:54:09 PM EST<br><b>To:</b> John ZuHone <<a href="mailto:jzuhone@space.mit.edu">jzuhone@space.mit.edu</a>><br><b>Subject:</b> <b>Re: [FLASH-USERS] VisIt 2.7.2 and FLASH 4.2.2</b><br><br></div></blockquote><blockquote type="cite"><div>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
Hi John,<br>
so, no luck. I'm trying to do this on raijin. <br>
<br>
<a class="moz-txt-link-freetext" href="http://nci.org.au/nci-systems/national-facility/peak-system/raijin/">http://nci.org.au/nci-systems/national-facility/peak-system/raijin/</a><br>
<br>
After logging in, the following modules are loaded.<br>
<br>
[irs120@raijin2 ~]$ module list<br>
Currently Loaded Modulefiles:<br>
1) pbs 4) openmpi/1.6.3 7) hdf5/1.8.10<br>
2) intel-fc/12.1.9.293 5) dot<br>
3) intel-cc/12.1.9.293 6) szip/2.1<br>
<br>
So what I've done is 'module unload intel-fc' and 'module unload
intel-cc' and 'module load gcc', after which I get<br>
<br>
[irs120@raijin2 ~]$ module list<br>
Currently Loaded Modulefiles:<br>
1) pbs 2) openmpi/1.6.3 3) dot 4)
szip/2.1 5) hdf5/1.8.10 6) gcc/system<br>
<br>
However, for some reason, I still get the same problem (see below).
It seems like that icc is still called, instead of gcc, although I
only have the gcc module loaded. Any thoughts?<br>
<br>
Thanks,<br>
<br>
Ivo<br>
<br>
>>>>>>>>>>><br>
<br>
Awesome! Here we go.<br>
<br>
Using wget<br>
Using sha512sum<br>
Setting YT_DIR=/home/120/irs120/yt-x86_64/src/yt-hg/<br>
Installing distribute<br>
Installing pip<br>
Installing numpy-1.8.2<br>
Installing matplotlib-1.4.0<br>
********************************************<br>
FAILURE REPORT:<br>
********************************************<br>
<br>
extern/qhull/qhull_a.h(106): error: expected a ";"<br>
template <typename T><br>
^<br>
<br>
extern/qhull/qhull_a.h(115): warning #12: parsing restarts here
after previous syntax error<br>
void qh_qhull(void);<br>
^<br>
<br>
compilation aborted for src/qhull_wrap.c (code 2)<br>
error: command 'icc' failed with exit status 2<br>
<br>
********************************************<br>
********************************************<br>
Failure. Check /home/120/irs120/yt-x86_64/yt_install.log. The last
10 lines are <br>
</div></blockquote></body></html>