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Thanks, will try that out! And yeah, I'm using the default python
install directory on my laptop, hence the sudo (I should start using
virtualenv, etc, I guess) Sam<br>
<br>
<div class="moz-cite-prefix">On 16/11/14 20:33, Nathan Goldbaum
wrote:<br>
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cite="mid:CAJXewOnjpGoBiv6iqnVsh+pBPr=ocwst5ec4fT8ToaagzbeHNQ@mail.gmail.com"
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<div>Hey Sam,<br>
<br>
I'm unable to reproduce this over here using
"setup.py install" from 7d39049. It's a little
suspicious that you needed to use sudo to
install things, but that might also be a red
herring depending on how your python environment
is set up.<br>
<br>
</div>
FWIW, here's the sequence of commands I would use:<br>
<br>
</div>
hg clone <a moz-do-not-send="true"
href="https://bitbucket.org/yt_analysis/yt">https://bitbucket.org/yt_analysis/yt</a><br>
</div>
<div>cd yt<br>
</div>
hg pull -r 7d39049 <a moz-do-not-send="true"
href="https://bitbucket.org/cosmosquark/yt"
target="_blank">https://bitbucket.org/cosmosquark/yt</a><br>
</div>
hg up 7d39049<br>
</div>
python setup.py develop<br>
<br>
</div>
Depending on how you've set up your python installation,
that last command might need a "sudo" so it can put the
egg-info file for the installation into your path.<br>
<br>
</div>
It might also be a good idea to clean out any old yt
installations your have by repeatedly doing "pip uninstall
yt".<br>
<br>
Python packaging, fun!<br>
<br>
</div>
<div>-Nathan<br>
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<br>
<div class="gmail_quote">On Sun, Nov 16, 2014
at 11:16 AM Sam Geen <<a
moz-do-not-send="true"
href="mailto:samgeen@astro.ox.ac.uk"
target="_blank">samgeen@astro.ox.ac.uk</a>>
wrote:<br>
<blockquote class="gmail_quote"
style="margin:0px 0px 0px
0.8ex;border-left:1px solid
rgb(204,204,204);padding-left:1ex">
<div bgcolor="#FFFFFF" text="#000000"> Hi
Nathan,<br>
<br>
I ran hg clone -r 7d39049 <a
moz-do-not-send="true"
href="https://bitbucket.org/cosmosquark/yt"
target="_blank">https://bitbucket.org/cosmosquark/yt</a><br>
then inside the yt folder<br>
sudo python setup.py install<br>
<br>
I'll try your suggestion of cloning the
main repo first instead.<br>
<br>
Cheers,<br>
<br>
Sam</div>
<div bgcolor="#FFFFFF" text="#000000"><br>
<br>
<div>On 16/11/14 20:14, Nathan Goldbaum
wrote:<br>
</div>
</div>
<div bgcolor="#FFFFFF" text="#000000">
<blockquote type="cite"> Hi Sam,<br>
<br>
Can you give a little bit more detail
about how exactly you ran the setup
script?<br>
<br>
The easiest way to do this is to clone
the yt mercurial repository, pull
Ben's changes into your local copy,
then do "python setup.py develop" in
the root of the repository.<br>
<br>
More detail here under "installing
using pip or from source":<br>
<br>
<a moz-do-not-send="true"
href="http://yt-project.org/doc/installing.html"
target="_blank">http://yt-project.org/doc/installing.html</a><br>
</blockquote>
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<blockquote type="cite">
<div class="gmail_quote">On Sun, Nov
16, 2014 at 7:23 AM Sam Geen <<a
moz-do-not-send="true"
href="mailto:samgeen@googlemail.com"
target="_blank">samgeen@googlemail.com</a>>
wrote:<br>
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<div class="gmail_quote">
<blockquote class="gmail_quote"
style="margin:0px 0px 0px
0.8ex;border-left:1px solid
rgb(204,204,204);padding-left:1ex">Hi,<br>
<br>
I'm trying to test a pull request,
and when I try to run yt after<br>
installing the setup script, it
gives me this error (below). The
folder<br>
"extern" is in the dist-packages
folder. The version I'm testing is<br>
<a moz-do-not-send="true"
href="https://bitbucket.org/cosmosquark/yt/commits/7d390496848a01fa113d24d1af249fac14c759a7"
target="_blank">https://bitbucket.org/cosmosquark/yt/commits/7d390496848a01fa113d24d1af249fac14c759a7</a><br>
<br>
Any ideas?<br>
<br>
Thanks,<br>
<br>
Sam<br>
<br>
In [2]: import yt<br>
---------------------------------------------------------------------------<br>
AttributeError
Traceback (most recent
call last)<br>
<ipython-input-2-59dfcfe9846c>
in <module>()<br>
----> 1 import yt<br>
<br>
/usr/local/lib/python2.7/dist-packages/yt-3.1dev-py2.7-linux-x86_64.egg/yt/__init__.py<br>
in <module>()<br>
79 import numpy # In case
anyone wishes to use it by name<br>
80<br>
---> 81 from yt.funcs import \<br>
82 iterable, \<br>
83 get_memory_usage, \<br>
<br>
/usr/local/lib/python2.7/dist-packages/yt-3.1dev-py2.7-linux-x86_64.egg/yt/funcs.py<br>
</blockquote>
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<div class="gmail_quote">
<blockquote class="gmail_quote"
style="margin:0px 0px 0px
0.8ex;border-left:1px solid
rgb(204,204,204);padding-left:1ex">
in <module>()hg clone -r
7d39049 <a moz-do-not-send="true"
href="https://bitbucket.org/cosmosquark/yt" target="_blank">https://bitbucket.org/cosmosquark/yt</a></blockquote>
</div>
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<div class="gmail_quote">
<blockquote class="gmail_quote"
style="margin:0px 0px 0px
0.8ex;border-left:1px solid
rgb(204,204,204);padding-left:1ex"><br>
<br>
25 from
yt.utilities.exceptions import *<br>
26 from yt.utilities.logger
import ytLogger as mylog<br>
---> 27 import
yt.extern.progressbar as pb<br>
28 import yt.utilities.rpdb
as rpdb<br>
29 from yt.units.yt_array
import YTArray, YTQuantity<br>
<br>
AttributeError: 'module' object
has no attribute 'extern'<br>
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