<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Chris, Ben and Nathan,<div class=""><br class=""></div><div class="">Thank you! That solved both my problems. </div><div class=""><br class=""></div><div class="">I needed to pip install pygments as Ben suggested and also 'apt-get install pandoc’, following a subsequent error.</div><div class=""><br class=""></div><div class="">The problem with the time series was that I’d missed the ‘yt’ out of yt.DataSeries. There’s actually a small mistake in the docs</div><div class=""><br class=""></div><div class=""><a href="http://yt-project.org/docs/3.0/analyzing/time_series_analysis.html#time-series-analysis" class="">http://yt-project.org/docs/3.0/analyzing/time_series_analysis.html#time-series-analysis</a></div><div class=""><br class=""></div><div class="">which also misses that out: I’ve submitted a pull request to fix this. </div><div class=""><br class=""></div><div class="">(As a side note, I also had to pip install sphinx_bootstrap_theme when I built the docs. That seems to be extra to sphinx itself.)</div><div class=""><br class=""></div><div class="">Elizabeth</div><div class=""><br class=""></div><div class=""><br class=""><div><blockquote type="cite" class=""><div class="">On Nov 14, 2014, at 1:49 AM, Chris Malone <<a href="mailto:chris.m.malone@gmail.com" class="">chris.m.malone@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class="">whoops, thanks for the clarification!<br class=""><br class=""><div class="gmail_quote">On Thu Nov 13 2014 at 9:44:06 AM Nathan Goldbaum <<a href="mailto:nathan12343@gmail.com" class="">nathan12343@gmail.com</a>> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Other way around, TimeSeriesData is deprecated.<br class=""><div class="gmail_quote">On Thu, Nov 13, 2014 at 7:01 AM Chris Malone <<a href="mailto:chris.m.malone@gmail.com" target="_blank" class="">chris.m.malone@gmail.com</a>> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi Elizabeth,<br class=""><br class="">For 2) how are you importing yt? If you are doing the recommended approach of `import yt`, then it should be `yt.DatasetSeries(...)`. FWIW, it does look like DatasetSeries is imported into the yt module, but has been deprecated (should still work) in favor of the TimeSeriesData object.<div class=""><br class=""></div><div class="">Chris</div><br class=""><div class="gmail_quote">On Thu Nov 13 2014 at 6:24:58 AM B.W. Keller <<a href="mailto:kellerbw@mcmaster.ca" target="_blank" class="">kellerbw@mcmaster.ca</a>> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr" class="">It looks like the first error is caused because the pygments library (which does the nice pretty syntax coloring) is missing. `pip install pygments` should fetch that for you.</div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Thu, Nov 13, 2014 at 5:59 AM, Elizabeth Tasker <span dir="ltr" class=""><<a href="mailto:tasker@astro1.sci.hokudai.ac.jp" target="_blank" class="">tasker@astro1.sci.hokudai.ac.jp</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi,<br class="">
<br class="">
I’m getting a batch of errors (OK… 2) when using python notebooks with yt 3.0:<br class="">
<br class="">
(1) I’m trying to export my python notebook into something shareable (ideally a pdf document). However, when I click ‘Print Preview’ or ‘Download as—> html’ I get the error:<br class="">
<br class="">
No module named pygments.formatters<br class="">
tornado.access: [ERROR ]<br class="">
<br class="">
Is there something extra I need to add to the yt python install to get this working? This happens both on my linux workstation and my macbook when I try and run nbconvert.<br class="">
<br class="">
<br class="">
(2) when I try:<br class="">
<br class="">
ts = DatasetSeries([“DD0002/sbcool_0002”, “DD0010/sbcool_0010”])<br class="">
<br class="">
I get the error<br class="">
<br class="">
NameError: name ‘DatasetSeries' is not defined<br class="">
<br class="">
is this something that slipped through being imported int yt 3?<br class="">
<br class="">
Elizabeth<br class="">
<br class="">
<br class="">
<br class="">
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