<div dir="ltr">Hi Matt,<div><br></div><div>That worked! Thanks for your help.</div><div><br></div><div>Alex</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Mon, Jun 16, 2014 at 11:26 AM, Matthew Turk <span dir="ltr"><<a href="mailto:matthewturk@gmail.com" target="_blank">matthewturk@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi Alex,<br>
<br>
Can you try changing your command to be explicitly:<br>
<br>
slc = SlicePlot(pf,'z',("gas", 'temperature'),width=(1,'kpc'),center=[0,0,0])<br>
<br>
and see if that addresses it? It looks like it's trying to get a<br>
fixed res of the particle temperature, which won't work.<br>
<br>
-Matt<br>
<div><div class="h5"><br>
On Mon, Jun 16, 2014 at 10:17 AM, ALEXANDER WOODFINDEN<br>
<<a href="mailto:woodfiaj@mcmaster.ca">woodfiaj@mcmaster.ca</a>> wrote:<br>
> Hi everyone,<br>
><br>
> I'm new to yt and am using the latest version (3.0), with support for TIPSY<br>
> output. I'm having issues creating temperature slices. The data I am using<br>
> is a periodic box, not equal length in all dimensions.<br>
><br>
> My script goes like this:<br>
><br>
> pf = load(fn, parameter_file=paramfile)<br>
> pf.field_list<br>
> slc = SlicePlot(pf,'z','temperature',width=(1,'kpc'),center=[0,0,0])<br>
><br>
> When I try to create the slice, I receive the following error:<br>
> In [9]: slc = SlicePlot(pf,'z','temperature',width=(1,'kpc'),center=[0,0,0])<br>
> yt : [INFO ] 2014-06-16 11:14:40,033 xlim = -0.500000 0.500000<br>
> yt : [INFO ] 2014-06-16 11:14:40,033 ylim = -0.500000 0.500000<br>
> yt : [INFO ] 2014-06-16 11:14:40,033 Making a fixed resolution buffer of<br>
> (('gas', 'temperature')) 800 by 800<br>
> yt : [INFO ] 2014-06-16 11:14:40,076 Making a fixed resolution buffer of<br>
> (('deposit', 'Gas_smoothed_temperature')) 800 by 800<br>
> yt : [INFO ] 2014-06-16 11:14:40,096 xlim = -0.500000 0.500000<br>
> yt : [INFO ] 2014-06-16 11:14:40,096 ylim = -0.500000 0.500000<br>
> yt : [INFO ] 2014-06-16 11:14:40,097 Making a fixed resolution buffer of<br>
> (('gas', 'temperature')) 800 by 800<br>
> yt : [INFO ] 2014-06-16 11:14:40,117 Making a fixed resolution buffer of<br>
> (('deposit', 'Gas_smoothed_temperature')) 800 by 800<br>
> yt : [INFO ] 2014-06-16 11:14:40,138 Making a fixed resolution buffer of<br>
> (('gas', 'temperature')) 800 by 800<br>
> yt : [INFO ] 2014-06-16 11:14:40,159 Making a fixed resolution buffer of<br>
> (('deposit', 'Gas_smoothed_temperature')) 800 by 800<br>
> yt : [INFO ] 2014-06-16 11:14:40,183 Making a fixed resolution buffer of<br>
> (('all', 'temperature')) 800 by 800<br>
> ---------------------------------------------------------------------------<br>
> error Traceback (most recent call last)<br>
> <ipython-input-9-4dae35760081> in <module>()<br>
> ----> 1 slc = SlicePlot(pf,'z','temperature',width=(1,'kpc'),center=[0,0,0])<br>
><br>
> /net/imp/3/home/woodfiaj/python/yt-3.0/yt/yt/visualization/plot_window.pyc<br>
> in SlicePlot(pf, normal, fields, axis, *args, **kwargs)<br>
> 1779 del kwargs['north_vector']<br>
> 1780<br>
> -> 1781 return AxisAlignedSlicePlot(pf, normal, fields, *args,<br>
> **kwargs)<br>
><br>
> /net/imp/3/home/woodfiaj/python/yt-3.0/yt/yt/visualization/plot_window.pyc<br>
> in __init__(self, pf, axis, fields, center, width, axes_unit, origin,<br>
> fontsize, field_parameters)<br>
> 1006 if axes_unit is None:<br>
> 1007 axes_unit = get_axes_unit(width, pf)<br>
> -> 1008 self.set_axes_unit(axes_unit)<br>
> 1009<br>
> 1010 class ProjectionPlot(PWViewerMPL):<br>
><br>
> /net/imp/3/home/woodfiaj/python/yt-3.0/yt/yt/visualization/plot_container.pyc<br>
> in newfunc(*args, **kwargs)<br>
> 53 rv = f(*args, **kwargs)<br>
> 54 args[0]._plot_valid = False<br>
> ---> 55 args[0]._setup_plots()<br>
> 56 return rv<br>
> 57 return newfunc<br>
><br>
> /net/imp/3/home/woodfiaj/python/yt-3.0/yt/yt/visualization/plot_window.pyc<br>
> in _setup_plots(self)<br>
> 745 zlim = (None, None)<br>
> 746<br>
> --> 747 image = self._frb[f]<br>
> 748<br>
> 749 if image.max() == image.min():<br>
><br>
> /net/imp/3/home/woodfiaj/python/yt-3.0/yt/yt/visualization/fixed_resolution.pyc<br>
> in __getitem__(self, item)<br>
> 123 buff = self.pf.coordinates.pixelize(self.data_source.axis,<br>
> 124 self.data_source, item, bounds, self.buff_size,<br>
> --> 125 int(self.antialias))<br>
> 126 # Need to add _period and self.periodic<br>
> 127 # self._period, int(self.periodic)<br>
><br>
> /net/imp/3/home/woodfiaj/python/yt-3.0/yt/yt/geometry/cartesian_coordinates.pyc<br>
> in pixelize(self, dimension, data_source, field, bounds, size, antialias,<br>
> periodic)<br>
> 52 if dimension < 3:<br>
> 53 return self._ortho_pixelize(data_source, field, bounds,<br>
> size,<br>
> ---> 54 antialias, dimension,<br>
> periodic)<br>
> 55 else:<br>
> 56 return self._oblique_pixelize(data_source, field,<br>
> bounds, size,<br>
><br>
> /net/imp/3/home/woodfiaj/python/yt-3.0/yt/yt/geometry/cartesian_coordinates.pyc<br>
> in _ortho_pixelize(self, data_source, field, bounds, size, antialias, dim,<br>
> periodic)<br>
> 69 data_source[field], size[0], size[1],<br>
> 70 bounds, int(antialias),<br>
> ---> 71 period, int(periodic)).transpose()<br>
> 72 return buff<br>
> 73<br>
><br>
> error: data is of incorrect type (wanted 1D float)<br>
><br>
> I have no idea what could be causing this, any ideas on how to solve this<br>
> error?<br>
><br>
> Alex<br>
><br>
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</blockquote></div><br></div>