<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Matt,<div><br></div><div>Here's what I came across:</div><div><br></div><div><div><font class="Apple-style-span" face="Courier">Failed to find the necessary bits to build these modules:</font></div><div><font class="Apple-style-span" face="Courier">_sqlite3 bsddb185 dl </font></div><div><font class="Apple-style-span" face="Courier">gdbm imageop sunaudiodev </font></div><div><font class="Apple-style-span" face="Courier">To find the necessary bits, look in setup.py in detect_modules() for the module's name.</font></div><div><br></div><div>I looked this routine up, but unfortunately can't make sense of how to change it to solve the problem.</div><div><br></div><div>-Brian</div><div><br></div><div><div>On Jul 8, 2010, at 4:30 PM, Matthew Turk wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div>Hi Brian,<br><br>Just before that line, it should say those are the modules that<br>weren't build. I'd suggest making sure your LD_LIBRARY_PATH is<br>correct, going into the src/Python-2.6.4 (or 2.6.1 or whatever)<br>directory in your yt build path, doing a "make clean" and "make<br>install" and watching to see if it says *why* _sqlite3 wasn't built.<br><br>-Matt<br><br>On Thu, Jul 8, 2010 at 1:28 PM, Brian Crosby <<a href="mailto:crosby.bd@gmail.com">crosby.bd@gmail.com</a>> wrote:<br><blockquote type="cite">Matt,<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">Everything in yt_install.log is either shown as "compiling" or "listing" except for the last line, which is simply<br></blockquote><blockquote type="cite">_sqlite3 bsddb185 dl<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">I'm not sure what that one means.<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">Thanks,<br></blockquote><blockquote type="cite">Brian<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">On Jul 8, 2010, at 4:22 PM, Matthew Turk wrote:<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite"><blockquote type="cite">Hi Brian,<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">Do you still have your yt_install.log file? It looks like _sqlite3<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">might simply not have been built. If you grep through yt_install.log,<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">do you see anything saying it was not built?<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">-Matt<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">On Thu, Jul 8, 2010 at 1:20 PM, Brian Crosby <<a href="mailto:crosby.bd@gmail.com">crosby.bd@gmail.com</a>> wrote:<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">Rick,<br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">After checking those paths, I found both libsqlite3.so.0 and libsqlite3.so.0.8.6 in /usr/lib64. If I'm reading your message correctly, this would mean that something else is causing my problem. Any clue why it can't import sqlite3 in that case?<br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">Thanks,<br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">Brian<br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">On Jul 8, 2010, at 3:44 PM, Rick Wagner wrote:<br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">Hi Brian,<br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">The directory you mention is actually for the package that's part of Python's standard library. If you're getting LD_LIBRARY_PATH errors, it's more than likely looking for the SQLite library, which will have a name like, libsqlite3.so, libsqlite3.so.0, or libsqlite3.so.0.8.6.<br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">If this is part of your operating system's distribution, the library will be in /usr/lib or /usr/lib64, and you won't need the LD_LIBRARY_PATH environment variable. However, if you installed SQLite yourself, you'll need to tell the Python sqlite3 package where to find the library.<br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">--Rick<br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">On Jul 8, 2010, at 12:32 PM, Brian Crosby wrote:<br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">Hi all,<br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">I've been trying to make a merger tree for Enzo simulation, am having some trouble. I think that the problem stems from sqlite3, or my misuse of it, but I'm not certain. I keep getting an error that LD_LIBRARY_PATH is undefined, but I currently have it set to $HOME/yt-x86_64/lib/python2.6/sqlite3/ so that may suggest that sqlite3 is not actually the culprit here.<br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">The script and output are both attached, any help or suggestions would be very appreciated.<br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">Thanks,<br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">Brian Crosby<br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><Merger_Tree.o1461174><MergerTree.py>_______________________________________________<br></blockquote></blockquote></blockquote></blockquote></blockquote><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite"><blockquote type="cite">yt-users mailing 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