[yt-users] yt errors

[Kacper Kowalik]

On 02/06/2016 09:03 PM, tazkera haque wrote:
> Hi , thanks very much for the helps. but I happen to get the errors still
> though I did the exact same things as suggested. I am attaching the summary
> and error.

Hi Tazkera,

clean.sh unfortunately doesn't remove cythonized modules (.c files). You 
can either manually remove the offending file 
(yt/geometry/grid_container.c) or use hg purge. In order to do the 
latter you'll need to add the following to $HOME/.hgrc:

[extensions]
hgext.purge =

Then try:

$ cd /work/03858/thaque56/sw/yt-3.1/yt-x86_64/src/yt-hg/
$ hg purge --all
$ python setup.py build_ext -i  # (or python setup.py develop)

Cheers,
Kacper

> On Sat, Feb 6, 2016 at 9:05 PM, Nathan Goldbaum <nathan12343 at gmail.com>
> wrote:
>
>> It looks like yt's C extensions need to be recompiled. Can you activate
>> the yt environment and do the following:
>>
>> $ cd /work/03858/thaque56/sw/yt-3.1/yt-x86_64/src/yt-hg/
>> $ bash ./clean.sh
>> $ hg pull
>> $ hg update
>> $ python setup.py develop
>>
>> If that doesn't work, can you reply with the output of "hg summary", as
>> well as the error that you see?
>>
>> Hope that helps,
>>
>> Nathan
>>
>> On Sat, Feb 6, 2016 at 7:25 PM, tazkera haque <h.tazkera at gmail.com> wrote:
>>
>>> Hi , I am trying to run a python file with yt packages on STAMPEDE. and
>>> getting some errors each time. I think the error is due to some
>>> installation error of yt at first place. can you please look at both my
>>> code and error and send me the solutions to solve the problem. both the
>>> files are attached for your convenience.
>>>
>>> regards
>>> Tazkera
>>>
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