[yt-users] yt 3.3.1 not working with yt 3.1 python scripts

tazkera haque h.tazkera at gmail.com
Fri Aug 26 11:40:24 PDT 2016


Hi Nathan,

I have just updated yt 3.3 and now I have this weird issue with the scripts
, I am uploading my script for sliceplots, which should just analyse the
super3d_hdf5_plt_cnt files but I have got issues which also pulls up the
super3d_hdf5_part files which are also located in the same path and
produces the error.

*yt : [INFO     ] 2016-08-26 13:23:36,817 Particle file found:
super3d_hdf5_part_0000*
*yt : [INFO     ] 2016-08-26 13:23:36,840 integer runtime parameter
checkpointfilenumber overwrites a simulation scalar of the same name*
*yt : [INFO     ] 2016-08-26 13:23:36,862 Parameters: current_time
     = 0.0*
*yt : [INFO     ] 2016-08-26 13:23:36,862 Parameters: domain_dimensions
    = [128 128 128]*
*yt : [INFO     ] 2016-08-26 13:23:36,863 Parameters: domain_left_edge
     = [ -2.80000000e+10  -2.80000000e+10  -2.80000000e+10]*
*yt : [INFO     ] 2016-08-26 13:23:36,863 Parameters: domain_right_edge
    = [  2.80000000e+10   2.80000000e+10   2.80000000e+10]*
*yt : [INFO     ] 2016-08-26 13:23:36,864 Parameters:
cosmological_simulation   = 0.0*
*yt : [INFO     ] 2016-08-26 13:23:38,500 xlim = -28000000000.000000
28000000000.000000*
*yt : [INFO     ] 2016-08-26 13:23:38,500 ylim = -28000000000.000000
28000000000.000000*
*yt : [INFO     ] 2016-08-26 13:23:38,501 xlim = -28000000000.000000
28000000000.000000*
*yt : [INFO     ] 2016-08-26 13:23:38,501 ylim = -28000000000.000000
28000000000.000000*
*yt : [INFO     ] 2016-08-26 13:23:38,502 Making a fixed resolution buffer
of (('flash', 'temp')) 800 by 800*
*yt : [INFO     ] 2016-08-26 13:23:39,016 Making a fixed resolution buffer
of (('flash', 'temp')) 800 by 800*
*yt : [INFO     ] 2016-08-26 13:23:39,252 Saving plot
Slice_z_temp/super3d_hdf5_plt_cnt_0000_Slice_z_temp.png*
*yt : [INFO     ] 2016-08-26 13:23:39,885 Particle file found:
super3d_hdf5_part_0001*
*Traceback (most recent call last):*
*  File "allSlices.py", line 115, in <module>*
*    ds=yt.load(filename)*
*  File
"/work/03858/thaque56/sw/yt-new-3.3/yt-conda/lib/python2.7/site-packages/yt/convenience.py",
line 86, in load*
*    return candidates[0](*args, **kwargs)*
*  File
"/work/03858/thaque56/sw/yt-new-3.3/yt-conda/lib/python2.7/site-packages/yt/frontends/flash/data_structures.py",
line 215, in __init__*
*    raise IOError('%s and  %s are not at the same time.' %
(self.particle_filename, filename))*
*IOError: /work/03858/thaque56/runs/run_176/super3d_hdf5_part_0001 and
 /work/03858/thaque56/runs/run_176/super3d_hdf5_plt_cnt_0001 are not at the
same time.*
*[c558-502.stampede.tacc.utexas.edu:mpispawn_0][child_handler] MPI process
(rank: 0, pid: 13788) exited with status 1*
*TACC: MPI job exited with code: 1*

Please take a look at the error and let me know how to avoid the particle
files in this circumstance.

Best
Tazkera
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