[yt-users] Create_profile error in parallel

John Regan johnanthonyregan at gmail.com
Fri May 15 00:10:24 PDT 2015


Hey,

Thanks. I'll start with your script and see if I can mine to behave. It is
an Enzo 3.0 dataset and it also has extra baryon and RT fields as well so
maybe that is doing something. Thanks!

John

On Fri, May 15, 2015 at 10:07 AM, Nathan Goldbaum <nathan12343 at gmail.com>
wrote:

> I'm not able to reproduce this using the following test script:
>
> http://paste.debian.net/177400/
>
> Of course, given that it failed on line 200, your script is more
> complicated than mine.  Can you alter or expand on my test script to make a
> minimal example that fails?  You can get enzo_tiny_cosmology from
> yt-project.org/data, but it might be the case that your dataset has some
> features that trigger this issue.
>
> In particular, is this an Enzo 3.0 dataset?  I also tried with the
> ActiveParticleCosmology and wasn't able to reproduce the issue with that
> one either.
>
> -Nathan
>
> On Thu, May 14, 2015 at 11:56 PM, John Regan <johnanthonyregan at gmail.com>
> wrote:
>
>> Hi Nathan,
>>
>> Here you go
>>
>> https://dl.dropboxusercontent.com/u/18978426/yt/tmp/error_test.txt
>>
>> On Fri, May 15, 2015 at 9:47 AM, Nathan Goldbaum <nathan12343 at gmail.com>
>> wrote:
>>
>>>
>>>
>>> On Thu, May 14, 2015 at 11:44 PM, John Regan <johnanthonyregan at gmail.com
>>> > wrote:
>>>
>>>> Hi All,
>>>>
>>>> I'm seeing an error when I run YT 3.2 in parallel. Running in serial
>>>> mode everything is fine. I have a bunch of fields I'm creating profiles for
>>>> 'DarkMatter' is not one of them but that's where it fails. It looks like
>>>> its picking up the DarkMatter radius rather than the gas radius?
>>>>
>>>>
>>>>  rp = yt.create_profile(sphere, 'radius', Fields,
>>>>                                units = {'radius': 'kpc'},
>>>>                                n_bins=40)
>>>> P002 yt : [ERROR    ] 2015-05-14 22:09:54,308 YTFieldNotFound: Could
>>>> not find field '('DarkMatter', 'radius')' in RD0001.
>>>>
>>>> I've attached the error file
>>>> http://paste.yt-project.org/show/5547/
>>>>
>>>
>>> Looks like the pastebin is down, can you paste it somewhere else?
>>>
>>>
>>>>
>>>> and the version info is:
>>>>
>>>> ---
>>>> Version = 3.2-dev
>>>> Changeset = 3e1887de7362+ (yt) tip
>>>> ---
>>>>
>>>> Thanks!
>>>>
>>>> John
>>>>
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>>>>
>>>>
>>>
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