[yt-users] SciPy installation problem
Caroline Van Borm
borm at astro.rug.nl
Wed Jan 14 09:35:06 PST 2015
Hi Matt,
It's installing 'scipy-0.12.0', so I guess the version would be 0.12.0?
By the way, when I use the option --fcompiler=gnu95, the error is the
same as what I wrote previously, and when I use the option
--fcompiler=fake, I get a different error:
Installing numpy-1.7.1 (arguments: '--fcompiler=fake')
Installing scipy-0.12.0 (arguments: '--fcompiler=fake')
********************************************
FAILURE REPORT:
********************************************
copying scipy/weave/base_info.py ->
build/lib.linux-x86_64-2.7/scipy/weave
creating build/lib.linux-x86_64-2.7/scipy/_build_utils
copying scipy/_build_utils/_fortran.py ->
build/lib.linux-x86_64-2.7/scipy/_build_utils
copying scipy/_build_utils/__init__.py ->
build/lib.linux-x86_64-2.7/scipy/_build_utils
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
don't know how to compile Fortran code on platform 'posix' with
'fake' compiler. Supported compilers are:
intelvem,none,absoft,compaq,intel,gnu,sun,nag,pathf95,ibm,gnu95,intelv,g95,intele,vast,lahey,pg,mips,hpux,intelev,intelem)
building 'dfftpack' library
error: library dfftpack has Fortran sources but no Fortran compiler
found
Thanks!
Cheers,
Caroline
On 01/14/2015 01:05 PM, Matthew Turk wrote:
> Hi Caroline,
>
> Hmm, I have not ever seen this before. Changing the NUMPY_ARGS to set
> a fake fortran compiler definitely should have fixed it, as it should
> then avoid compiling any of fftpack. Can you recall which version of
> scipy is installed by 2.6.1?
>
> -Matt
>
> On Tue, Jan 13, 2015 at 11:10 AM, Caroline Van Borm <borm at astro.rug.nl
> <mailto:borm at astro.rug.nl>> wrote:
>
> Dear yt users,
>
> I'm having some trouble installing SciPy. I can install yt just
> fine using the install script, but if I turn the option for
> installing SciPy on, I get the following error:
>
> creating build/temp.linux-x86_64-2.7/scipy/fftpack/src/dfftpack
> compile options:
> '-I/data/users/borm/YT/yt-x86_64/lib/python2.7/site-packages/numpy/core/include
> -c'
> f77.sh:f77: scipy/fftpack/src/dfftpack/dsint.f
> Cannot open file dsint.f
> gcc: dsint.c: No such file or directory
> gcc: no input files
> Cannot open file dsint.f
> gcc: dsint.c: No such file or directory
> gcc: no input files
> error: Command "/iraf/iraf/unix/hlib//f77.sh -Wall
> -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops
> -I/data/users/borm/YT/yt-x86_64/lib/python2.7/site-packages/numpy/core/include
> -c -c scipy/fftpack/src/dfftpack/dsint.f -o
> build/temp.linux-x86_64-2.7/scipy/fftpack/src/dfftpack/dsint.o" failed
> with exit status 1
>
> I've tried uncommenting the NUMPY_ARGS lines one by one as
> suggested in the script, but none of that seems to work.
> I'm using yt version 2.6.1, changeset e0906fc5b6d5, if that helps.
>
> Any ideas on how to fix this? Thanks!
>
> Cheers,
> Caroline
>
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