[yt-users] yt-users Digest, Vol 79, Issue 35

Brandon Bozek brandon.bozek at gmail.com
Fri Sep 26 14:29:42 PDT 2014


Thanks for the series of replies.

I ran "bash install_script.sh" to start the install. I am able to create
file/directory in the directory I am in. The install script creates
./yt-x86_64/ and downloads a bunch of files before hitting this hiccup.


On Fri, Sep 26, 2014 at 5:21 PM, <yt-users-request at lists.spacepope.org>
wrote:

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> Today's Topics:
>
>    1. install error on large cluster (Brandon Bozek)
>    2. Re: install error on large cluster (Nathan Goldbaum)
>    3. Re: install error on large cluster (Chris Malone)
>    4. Re: install error on large cluster (Nathan Goldbaum)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Fri, 26 Sep 2014 17:03:58 -0400
> From: Brandon Bozek <brandon.bozek at gmail.com>
> To: yt-users at lists.spacepope.org
> Subject: [yt-users] install error on large cluster
> Message-ID:
>         <CADMUOqetC_YKk6TAiW+YKxSqbm5edmdx7s_t=
> xS6z+3q4v5W4A at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> Hello All,
>
> I am trying to install yt on a cluster at my institution and I ran the
> install script for the stable version and got this error: "error: could not
> create '/usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial':
> Read-only file system".
>
> The last few lines are copied below. Please let me know if I should send
> anything else.
>
> Thanks!
> Brandon
>
> creating build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/coal-folder.png ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/style-gitweb.css ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/background.png ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/style-coal.css ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/hglogo.png ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/style-paper.css ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/style.css ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/excanvas.js ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/coal-file.png ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/hgicon.png ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/mercurial.js ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/feed-icon-14x14.png ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> copying mercurial/templates/static/style-monoblue.css ->
> build/lib.linux-x86_64-2.7/mercurial/templates/static
>
> running build_scripts
>
> creating build/scripts-2.7
>
> copying and adjusting hg -> build/scripts-2.7
>
> changing mode of build/scripts-2.7/hg from 644 to 755
>
> running install
>
> running build
>
> running build_mo
>
> running build_ext
>
> running build_py
>
> running build_scripts
>
> running install_lib
>
> creating /usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial
>
> error: could not create
> '/usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial': Read-only
> file system
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>
> ------------------------------
>
> Message: 2
> Date: Fri, 26 Sep 2014 14:07:04 -0700
> From: Nathan Goldbaum <nathan12343 at gmail.com>
> To: Discussion of the yt analysis package
>         <yt-users at lists.spacepope.org>
> Subject: Re: [yt-users] install error on large cluster
> Message-ID:
>         <
> CAJXewOmmu0Oux1FaTFndS4jT_ede0waH3_VdtzeHgKFuELr-oA at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> Hi Brandon,
>
> How did you invoke the install script?
>
> -Nathan
>
> On Fri, Sep 26, 2014 at 2:03 PM, Brandon Bozek <brandon.bozek at gmail.com>
> wrote:
>
> > Hello All,
> >
> > I am trying to install yt on a cluster at my institution and I ran the
> > install script for the stable version and got this error: "error: could
> not
> > create '/usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial':
> > Read-only file system".
> >
> > The last few lines are copied below. Please let me know if I should send
> > anything else.
> >
> > Thanks!
> > Brandon
> >
> > creating build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/coal-folder.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style-gitweb.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/background.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style-coal.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/hglogo.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style-paper.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/excanvas.js ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/coal-file.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/hgicon.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/mercurial.js ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/feed-icon-14x14.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style-monoblue.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > running build_scripts
> >
> > creating build/scripts-2.7
> >
> > copying and adjusting hg -> build/scripts-2.7
> >
> > changing mode of build/scripts-2.7/hg from 644 to 755
> >
> > running install
> >
> > running build
> >
> > running build_mo
> >
> > running build_ext
> >
> > running build_py
> >
> > running build_scripts
> >
> > running install_lib
> >
> > creating /usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial
> >
> > error: could not create
> > '/usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial':
> Read-only
> > file system
> >
> > _______________________________________________
> > yt-users mailing list
> > yt-users at lists.spacepope.org
> > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
> >
> >
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>
> ------------------------------
>
> Message: 3
> Date: Fri, 26 Sep 2014 15:18:26 -0600
> From: Chris Malone <chris.m.malone at gmail.com>
> To: Discussion of the yt analysis package
>         <yt-users at lists.spacepope.org>
> Subject: Re: [yt-users] install error on large cluster
> Message-ID:
>         <
> CAED6uLZnaSBn0z_9T4yzMd1PzQRrT3jUyRU+eWK6tqT3i7XC6A at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> Hi Brandon,
>
> The 'Read-only file system' part makes me think the issue isn't related to
> the yt build.  Usually that message happens when the filesystem detected an
> error and the OS remounts the file system in read-only mode.  Are there any
> other issues on the FS?  Are you able to manually create a file/directory
> on that FS?
>
> Chris
>
> On Fri, Sep 26, 2014 at 3:03 PM, Brandon Bozek <brandon.bozek at gmail.com>
> wrote:
>
> > Hello All,
> >
> > I am trying to install yt on a cluster at my institution and I ran the
> > install script for the stable version and got this error: "error: could
> not
> > create '/usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial':
> > Read-only file system".
> >
> > The last few lines are copied below. Please let me know if I should send
> > anything else.
> >
> > Thanks!
> > Brandon
> >
> > creating build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/coal-folder.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style-gitweb.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/background.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style-coal.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/hglogo.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style-paper.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/excanvas.js ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/coal-file.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/hgicon.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/mercurial.js ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/feed-icon-14x14.png ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > copying mercurial/templates/static/style-monoblue.css ->
> > build/lib.linux-x86_64-2.7/mercurial/templates/static
> >
> > running build_scripts
> >
> > creating build/scripts-2.7
> >
> > copying and adjusting hg -> build/scripts-2.7
> >
> > changing mode of build/scripts-2.7/hg from 644 to 755
> >
> > running install
> >
> > running build
> >
> > running build_mo
> >
> > running build_ext
> >
> > running build_py
> >
> > running build_scripts
> >
> > running install_lib
> >
> > creating /usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial
> >
> > error: could not create
> > '/usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial':
> Read-only
> > file system
> >
> > _______________________________________________
> > yt-users mailing list
> > yt-users at lists.spacepope.org
> > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
> >
> >
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> >
>
> ------------------------------
>
> Message: 4
> Date: Fri, 26 Sep 2014 14:20:58 -0700
> From: Nathan Goldbaum <nathan12343 at gmail.com>
> To: Discussion of the yt analysis package
>         <yt-users at lists.spacepope.org>
> Subject: Re: [yt-users] install error on large cluster
> Message-ID:
>         <
> CAJXewOm4JzsXUGPhDpQ6CfnM1XNkMTR5xDemLx14hivKWy_dPA at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> On Fri, Sep 26, 2014 at 2:18 PM, Chris Malone <chris.m.malone at gmail.com>
> wrote:
>
> > Hi Brandon,
> >
> > The 'Read-only file system' part makes me think the issue isn't related
> to
> > the yt build.  Usually that message happens when the filesystem detected
> an
> > error and the OS remounts the file system in read-only mode.  Are there
> any
> > other issues on the FS?  Are you able to manually create a file/directory
> > on that FS?
> >
>
> Note that mercurial is being installed into /usr/local, which should never
> happen using the install script.  That's why I asked how the install script
> was being invoked.
>
>
> >
> > Chris
> >
> > On Fri, Sep 26, 2014 at 3:03 PM, Brandon Bozek <brandon.bozek at gmail.com>
> > wrote:
> >
> >> Hello All,
> >>
> >> I am trying to install yt on a cluster at my institution and I ran the
> >> install script for the stable version and got this error: "error: could
> not
> >> create '/usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial':
> >> Read-only file system".
> >>
> >> The last few lines are copied below. Please let me know if I should send
> >> anything else.
> >>
> >> Thanks!
> >> Brandon
> >>
> >> creating build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/coal-folder.png ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/style-gitweb.css ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/background.png ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/style-coal.css ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/hglogo.png ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/style-paper.css ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/style.css ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/excanvas.js ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/coal-file.png ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/hgicon.png ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/mercurial.js ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/feed-icon-14x14.png ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> copying mercurial/templates/static/style-monoblue.css ->
> >> build/lib.linux-x86_64-2.7/mercurial/templates/static
> >>
> >> running build_scripts
> >>
> >> creating build/scripts-2.7
> >>
> >> copying and adjusting hg -> build/scripts-2.7
> >>
> >> changing mode of build/scripts-2.7/hg from 644 to 755
> >>
> >> running install
> >>
> >> running build
> >>
> >> running build_mo
> >>
> >> running build_ext
> >>
> >> running build_py
> >>
> >> running build_scripts
> >>
> >> running install_lib
> >>
> >> creating /usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial
> >>
> >> error: could not create
> >> '/usr/local/python/2.7.3/lib/python2.7/site-packages/mercurial':
> Read-only
> >> file system
> >>
> >> _______________________________________________
> >> yt-users mailing list
> >> yt-users at lists.spacepope.org
> >> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
> >>
> >>
> >
> > _______________________________________________
> > yt-users mailing list
> > yt-users at lists.spacepope.org
> > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
> >
> >
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>
> Subject: Digest Footer
>
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> ------------------------------
>
> End of yt-users Digest, Vol 79, Issue 35
> ****************************************
>
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