[yt-users] Rollback to yt version 2.x problem

Matthew Turk matthewturk at gmail.com
Thu Sep 18 04:04:32 PDT 2014


Hi Roberto,

I'm not sure what that error means, other than it can't make your
fKDtree installation work.  One workaround would be to "pip uninstall
forthon" which will prevent it from trying to compile.  Another would
be to forcibly update, which may be dangerous if you have made
modifications to the source:

hg up -C -r yt-2.x
hg purge
python2.7 setup.py develop

Stop by IRC if you want to work through this in lower-latency...

-Matt

On Wed, Sep 17, 2014 at 7:24 PM, trobolo dinni
<trobolo.trobolo.dinni5 at gmail.com> wrote:
> Dear yt users,
>
> recently I updated yt with the update command from version 2 to version 3,
> but (my error) I did not notice all the changes that had been made from one
> to the other version.
>
> I tried to rollback to version 2.x following the method suggested in this
> page of the website http://yt-project.org/docs/dev/installing.html for the
> installation made via the user_script, but when I launche the command
>
> python setup.py develop
>
> I get the following error:
>
> (yt-x86_64)cthulhu at 42828678:~/yt-x86_64/src/yt-hg$ python setup.py develop
> PNG_LOCATION: png.cfg: /home/cthulhu/yt-x86_64/include,
> /home/cthulhu/yt-x86_64/lib
> FTYPE_LOCATION: FTYPE found via ctypes in: /home/cthulhu/yt-x86_64/include,
> /home/cthulhu/yt-x86_64/lib
> HDF5_LOCATION: HDF5 found via ctypes in: /home/cthulhu/yt-x86_64/include,
> /home/cthulhu/yt-x86_64/lib
> running develop
> running build_scripts
> running egg_info
> running build_src
> running build_forthon
> Building package fKD
> Traceback (most recent call last):
>   File "/home/cthulhu/yt-x86_64/bin/Forthon", line 2, in <module>
>     import Forthon.Forthon_builder
>   File
> "/home/cthulhu/yt-x86_64/lib/python2.7/site-packages/Forthon/Forthon_builder.py",
> line 88, in <module>
>     raise Exception('Main fortran file can not be found, please specify
> using the fortranfile option')
> Exception: Main fortran file can not be found, please specify using the
> fortranfile option
> Traceback (most recent call last):
>   File "setup.py", line 281, in <module>
>     setup_package()
>   File "setup.py", line 276, in setup_package
>     'build_src': my_build_src, 'install_data': my_install_data},
>   File
> "/home/cthulhu/yt-x86_64/lib/python2.7/site-packages/numpy/distutils/core.py",
> line 169, in setup
>     return old_setup(**new_attr)
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/core.py", line 151,
> in setup
>     dist.run_commands()
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/dist.py", line 953,
> in run_commands
>     self.run_command(cmd)
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/dist.py", line 972,
> in run_command
>     cmd_obj.run()
>   File
> "/home/cthulhu/yt-x86_64/lib/python2.7/site-packages/distribute-0.6.32-py2.7.egg/setuptools/command/develop.py",
> line 27, in run
>     self.install_for_development()
>   File
> "/home/cthulhu/yt-x86_64/lib/python2.7/site-packages/numpy/distutils/command/develop.py",
> line 17, in install_for_development
>     old_develop.install_for_development(self)
>   File
> "/home/cthulhu/yt-x86_64/lib/python2.7/site-packages/distribute-0.6.32-py2.7.egg/setuptools/command/develop.py",
> line 110, in install_for_development
>     self.run_command('egg_info')
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/cmd.py", line 326,
> in run_command
>     self.distribution.run_command(command)
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/dist.py", line 972,
> in run_command
>     cmd_obj.run()
>   File
> "/home/cthulhu/yt-x86_64/lib/python2.7/site-packages/numpy/distutils/command/egg_info.py",
> line 10, in run
>     self.run_command("build_src")
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/cmd.py", line 326,
> in run_command
>     self.distribution.run_command(command)
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/dist.py", line 972,
> in run_command
>     cmd_obj.run()
>   File "setup.py", line 192, in run
>     self.run_command("build_forthon")
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/cmd.py", line 326,
> in run_command
>     self.distribution.run_command(command)
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/distutils/dist.py", line 972,
> in run_command
>     cmd_obj.run()
>   File "setup.py", line 62, in run
>     subprocess.check_call(cmd, shell=False)
>   File "/home/cthulhu/yt-x86_64/lib/python2.7/subprocess.py", line 540, in
> check_call
>     raise CalledProcessError(retcode, cmd)
> subprocess.CalledProcessError: Command
> '['/home/cthulhu/yt-x86_64/bin/Forthon', '-F', 'gfortran',
> '--compile_first', 'fKD_source', '--no2underscores', '--fopt', "'-O3'",
> 'fKD', 'fKD_source.f90']' returned non-zero exit status 1
>
> I would like to ask some suggestions on how to solve the problem.
>
> Thanks,
>                 Roberto
>
>
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