[yt-users] ZeroDivisionError accessing field from ray in spherical 1D FLASH data

Luke Zoltan Kelley lkelley at cfa.harvard.edu
Mon Jun 23 09:44:22 PDT 2014


Hello yt-users,

Just starting using YT, please forgive simple problems.

I have 1D spherical FLASH data which I'm trying to plot.  I thought I should use a 'ray', so I created one as such and try to access the data but I'm getting a ZeroDivision Error:

from yt.mods import *
pf = load('starwind_hdf5_plt_cnt_0000')
In [141]: ray = pf.h.ray([0.0,0.0,0.0],[1.0e11,0.0,0.0], fields=["Density"])
In [142]: ray['Density']

yt : [INFO     ] 2014-06-23 12:40:51,841 Getting field t from 138
ERROR: ZeroDivisionError: float division [IPython.core.interactiveshell]
astropy: [ERROR    ] 2014-06-23 12:40:51,846 ZeroDivisionError: float division
---------------------------------------------------------------------------
ZeroDivisionError                         Traceback (most recent call last)
<ipython-input-142-c8a80a171d35> in <module>()
----> 1 ray['Density']

/Users/lzkelley/Applications/yt/yt-x86_64/src/yt-hg/yt/data_objects/data_containers.pyc in __getitem__(self, key)
    316             if key not in self.fields:
    317                 self.fields.append(key)
--> 318             self.get_data(key)
    319         return self.field_data[key]
    320 

/Users/lzkelley/Applications/yt/yt-x86_64/src/yt-hg/yt/data_objects/data_containers.pyc in get_data(self, fields, in_grids)
    523             self[field] = np.concatenate(
    524                 [self._get_data_from_grid(grid, field)
--> 525                  for grid in self._grids])
    526             if not self.field_data.has_key(field):
    527                 continue

/Users/lzkelley/Applications/yt/yt-x86_64/src/yt-hg/yt/data_objects/data_containers.pyc in save_state(self, grid, field, *args, **kwargs)
     79         old_keys = grid.field_data.keys()
     80         grid.field_parameters = self.field_parameters
---> 81         tr = func(self, grid, field, *args, **kwargs)
     82         grid.field_parameters = old_params
     83         grid.field_data = YTFieldData( [(k, grid.field_data[k]) for k in old_keys] )

/Users/lzkelley/Applications/yt/yt-x86_64/src/yt-hg/yt/data_objects/data_containers.pyc in _get_data_from_grid(self, grid, field)
    689     @restore_grid_state
    690     def _get_data_from_grid(self, grid, field):
--> 691         mask = np.logical_and(self._get_cut_mask(grid),
    692                               grid.child_mask)
    693         if field == 'dts': return self._dts[grid.id][mask]

/Users/lzkelley/Applications/yt/yt-x86_64/src/yt-hg/yt/data_objects/data_containers.pyc in check_cache(self, grid)
    109         elif grid.id not in self._cut_masks or \
    110                 hasattr(self, "_boolean_touched"):
--> 111             cm = func(self, grid)
    112             self._cut_masks[grid.id] = cm
    113         return self._cut_masks[grid.id]

/Users/lzkelley/Applications/yt/yt-x86_64/src/yt-hg/yt/data_objects/data_containers.pyc in _get_cut_mask(self, grid)
    704         ts = np.zeros(grid.ActiveDimensions, dtype='float64')
    705         VoxelTraversal(mask, ts, dts, grid.LeftEdge, grid.RightEdge,
--> 706                        grid.dds, self.center, self.vec)
    707         self._dts[grid.id] = np.abs(dts)
    708         self._ts[grid.id] = np.abs(ts)

/Users/lzkelley/Applications/yt/yt-x86_64/src/yt-hg/yt/utilities/lib/RayIntegrators.so in yt.utilities.lib.RayIntegrators.VoxelTraversal (yt/utilities/lib/RayIntegrators.c:3408)()

ZeroDivisionError: float division


yt instinfo
Version = 2.6.1
Changeset = c7bae05dd4ef


Any ideas what I'm doing wrong?
Thanks!
Luke




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