[yt-users] updated to latest change set - now can't load gadget data

[Matthew Turk]

To be safe, try:

hg up -C 8bd9f

Which will put you on the development branch of yt.
On Aug 4, 2014 1:23 PM, "Brendan Griffen" <brendan.f.griffen at gmail.com>
wrote:

>  loadyt; cd $YT_DEST/src/yt-hg; hg pull
> http://bitbucket.org/yt_analysis/yt; hg up; python2.7 setup.py build_ext
> -i'
>
> Gave me change set:
>
> ---
>
> 4f4914860077
>
> ---
>
> This good?
>
> BG
>
>
> On Mon, Aug 4, 2014 at 2:20 PM, Matthew Turk <matthewturk at gmail.com>
> wrote:
>
>> Hi Brendan,
>>
>> That's my fork, which is pretty old and outdated. The object isn't even
>> called a StaticOutput anymore.
>>
>> You should be able to pull from yt_analysis/yt and update (as of the
>> release a few hours ago) to the "yt" branch. 3.0 is now the default.
>>
>> Matt
>> On Aug 4, 2014 1:17 PM, "Brendan Griffen" <brendan.f.griffen at gmail.com>
>> wrote:
>>
>>> Hi,
>>>
>>> I just did:
>>>
>>> loadyt; cd $YT_DEST/src/yt-hg; hg pull
>>> http://bitbucket.org/MatthewTurk/yt-3.0; hg up; python2.7 setup.py
>>> build_ext -i
>>>
>>> I then did the following (which worked previously):
>>> pf = load(basepath+ext+'.0.hdf5')
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,101 Calculating time from 2.128e-02
>>> to be 1.671e+15 seconds
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,102 Assuming length units are in
>>> Mpc/h (comoving)
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,102 Parameters: current_time
>>>       = 1.67110631651e+15
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,102 Parameters: domain_dimensions
>>>       = [2 2 2]
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,103 Parameters: domain_left_edge
>>>       = [ 0.  0.  0.]
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,103 Parameters: domain_right_edge
>>>       = [ 100.  100.  100.]
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters:
>>> cosmological_simulation   = 1
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters: current_redshift
>>>       = 45.999999479
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters: omega_lambda
>>>       = 0.6825
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters: omega_matter
>>>       = 0.3175
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters: hubble_constant
>>>       = 0.6711
>>>
>>> yt : [INFO     ] 2014-08-04 14:11:07,285 Allocating for 1.074e+09
>>> particles
>>>
>>> yt : [INFO     ] 2014-08-04 14:14:25,748 Identified 6.401e+07 octs
>>>
>>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>>> ('PartType1', 'Coordinates') to list of fields
>>>
>>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>>> ('PartType1', 'ParticleIDs') to list of fields
>>>
>>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>>> ('PartType1', 'Potential') to list of fields
>>>
>>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>>> ('PartType1', 'Velocities') to list of fields
>>>
>>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>>> ('PartType1', 'Masses') to list of fields
>>>
>>> yt : [INFO     ] 2014-08-04 14:14:26,095 Adding unknown field ('all',
>>> 'Potential') to list of fields
>>>
>>>
>>> ---------------------------------------------------------------------------
>>>
>>> AttributeError                            Traceback (most recent call
>>> last)
>>>
>>>
>>> /nfs/blank/h4231/bgriffen/data/lib/yt-x86_64/lib/python2.7/site-packages/IPython/utils/py3compat.pyc
>>> in execfile(fname, *where)
>>>
>>>     202             else:
>>>
>>>     203                 filename = fname
>>>
>>> --> 204             __builtin__.execfile(filename, *where)
>>>
>>>
>>> /nfs/blank/h4231/bgriffen/work/projects/caterpillar/c2ray/code/submitcic/ytcic.py
>>> in <module>()
>>>
>>> ---> 59     rho_crit_0 = pf.cosmology.critical_density(0.)
>>>
>>> AttributeError: 'GadgetHDF5StaticOutput' object has no attribute
>>> 'cosmology'
>>>
>>> It seems the data has no attributes now?
>>>
>>> Brendan
>>>
>>> _______________________________________________
>>> yt-users mailing list
>>> yt-users at lists.spacepope.org
>>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
>>>
>>>
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