[yt-users] updated to latest change set - now can't load gadget data

[Brendan Griffen]

loadyt; cd $YT_DEST/src/yt-hg; hg pull http://bitbucket.org/yt_analysis/yt;
hg up; python2.7 setup.py build_ext -i'

Gave me change set:

---

4f4914860077

---

This good?

BG


On Mon, Aug 4, 2014 at 2:20 PM, Matthew Turk <matthewturk at gmail.com> wrote:

> Hi Brendan,
>
> That's my fork, which is pretty old and outdated. The object isn't even
> called a StaticOutput anymore.
>
> You should be able to pull from yt_analysis/yt and update (as of the
> release a few hours ago) to the "yt" branch. 3.0 is now the default.
>
> Matt
> On Aug 4, 2014 1:17 PM, "Brendan Griffen" <brendan.f.griffen at gmail.com>
> wrote:
>
>> Hi,
>>
>> I just did:
>>
>> loadyt; cd $YT_DEST/src/yt-hg; hg pull
>> http://bitbucket.org/MatthewTurk/yt-3.0; hg up; python2.7 setup.py
>> build_ext -i
>>
>> I then did the following (which worked previously):
>> pf = load(basepath+ext+'.0.hdf5')
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,101 Calculating time from 2.128e-02
>> to be 1.671e+15 seconds
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,102 Assuming length units are in
>> Mpc/h (comoving)
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,102 Parameters: current_time
>>       = 1.67110631651e+15
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,102 Parameters: domain_dimensions
>>       = [2 2 2]
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,103 Parameters: domain_left_edge
>>       = [ 0.  0.  0.]
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,103 Parameters: domain_right_edge
>>       = [ 100.  100.  100.]
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters:
>> cosmological_simulation   = 1
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters: current_redshift
>>       = 45.999999479
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters: omega_lambda
>>       = 0.6825
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters: omega_matter
>>       = 0.3175
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,104 Parameters: hubble_constant
>>       = 0.6711
>>
>> yt : [INFO     ] 2014-08-04 14:11:07,285 Allocating for 1.074e+09
>> particles
>>
>> yt : [INFO     ] 2014-08-04 14:14:25,748 Identified 6.401e+07 octs
>>
>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>> ('PartType1', 'Coordinates') to list of fields
>>
>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>> ('PartType1', 'ParticleIDs') to list of fields
>>
>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>> ('PartType1', 'Potential') to list of fields
>>
>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>> ('PartType1', 'Velocities') to list of fields
>>
>> yt : [INFO     ] 2014-08-04 14:14:25,994 Adding unknown field
>> ('PartType1', 'Masses') to list of fields
>>
>> yt : [INFO     ] 2014-08-04 14:14:26,095 Adding unknown field ('all',
>> 'Potential') to list of fields
>>
>>
>> ---------------------------------------------------------------------------
>>
>> AttributeError                            Traceback (most recent call
>> last)
>>
>>
>> /nfs/blank/h4231/bgriffen/data/lib/yt-x86_64/lib/python2.7/site-packages/IPython/utils/py3compat.pyc
>> in execfile(fname, *where)
>>
>>     202             else:
>>
>>     203                 filename = fname
>>
>> --> 204             __builtin__.execfile(filename, *where)
>>
>>
>> /nfs/blank/h4231/bgriffen/work/projects/caterpillar/c2ray/code/submitcic/ytcic.py
>> in <module>()
>>
>> ---> 59     rho_crit_0 = pf.cosmology.critical_density(0.)
>>
>> AttributeError: 'GadgetHDF5StaticOutput' object has no attribute
>> 'cosmology'
>>
>> It seems the data has no attributes now?
>>
>> Brendan
>>
>> _______________________________________________
>> yt-users mailing list
>> yt-users at lists.spacepope.org
>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
>>
>>
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