[yt-users] After updating YT an error occurs

Seyit Hocuk seyit at astro.rug.nl
Thu Sep 12 07:22:24 PDT 2013


Yes, thanks. That did the trick.
This is not the dev version right?

Best,
Seyit




On 09/12/2013 04:20 PM, Seyit Hocuk wrote:
> Hi Matt,
>
> That seems to have worked. It is installing stuff now.
>
> Seyit.
>
>
>
> On 09/12/2013 04:15 PM, Matthew Turk wrote:
>> Hi Seyit,
>>
>> That's pretty weird.  One more thing to try, and if it doesn't work,
>> I'd encourage you to download a new copy of the install script and run
>> it *in place* over top of the existing installation.  This will update
>> only those dependencies that need to be.
>>
>> Here's the thing to try:
>>
>> cd /net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/
>> python2.7 distribute_setup.py
>> python2.7 setup.py build_ext -i -f
>>
>> On Thu, Sep 12, 2013 at 10:12 AM, Seyit Hocuk <seyit at astro.rug.nl> 
>> wrote:
>>> Hi Matt,
>>>
>>> The commands give me:
>>>
>>>
>>> python2.7 setup.py build_ext -i -f
>>> The required version of distribute (>=0.6.32) is not available,
>>> and can't be installed while this script is running. Please
>>> install a more recent version first, using
>>> 'easy_install -U distribute'.
>>>
>>> (Currently using distribute 0.6.21
>>> (/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/lib/python2.7/site-packages/distribute-0.6.21-py2.7.egg)) 
>>>
>>>
>>>
>>> python2.7 -c "import yt.utilities.lib.write_array"
>>>
>>> Traceback (most recent call last):
>>>    File "<string>", line 1, in <module>
>>>    File "yt/utilities/lib/__init__.py", line 42, in <module>
>>>
>>>      from .write_array import *
>>> ImportError: No module named write_array
>>>
>>> Best,
>>> Seyit
>>>
>>>
>>>
>>> On 09/12/2013 04:09 PM, Matthew Turk wrote:
>>>> Hi Seyit,
>>>>
>>>> That's odd.  It should exist in there; the only thing I can think of
>>>> is that it may need a full recompilation.  Can you try:
>>>>
>>>> (activate your environment however, making sure your GNU modules or
>>>> whatever are loaded)
>>>> cd /net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/
>>>> python2.7 setup.py build_ext -i -f
>>>>
>>>> and then try again?  If you run into the issue once more, the output
>>>> from this specific command may help diagnose it:
>>>>
>>>> python2.7 -c "import yt.utilities.lib.write_array"
>>>>
>>>> Best,
>>>>
>>>> Matt
>>>>
>>>> On Thu, Sep 12, 2013 at 8:42 AM, Seyit Hocuk <seyit at astro.rug.nl> 
>>>> wrote:
>>>>> Hi,
>>>>>
>>>>> After I update my YT, I get this error when using my script. Probably
>>>>> some
>>>>> paths are wrong? I included the updater.log.
>>>>>
>>>>> ./ytmaps.py
>>>>> Traceback (most recent call last):
>>>>>     File "./ytmaps.py", line 5, in <module>
>>>>>       from yt.mods import *
>>>>>     File
>>>>>
>>>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/mods.py", 
>>>>>
>>>>> line 60, in <module>
>>>>>       from yt.data_objects.api import \
>>>>>     File
>>>>>
>>>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/data_objects/api.py", 
>>>>>
>>>>> line 31, in <module>
>>>>>       from grid_patch import \
>>>>>     File
>>>>>
>>>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/data_objects/grid_patch.py", 
>>>>>
>>>>> line 35, in <module>
>>>>>       from yt.data_objects.data_containers import YTFieldData
>>>>>     File
>>>>>
>>>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/data_objects/data_containers.py", 
>>>>>
>>>>> line 45, in <module>
>>>>>       from yt.data_objects.derived_quantities import 
>>>>> GridChildMaskWrapper
>>>>>     File
>>>>>
>>>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/data_objects/derived_quantities.py", 
>>>>>
>>>>> line 36, in <module>
>>>>>       from yt.utilities.parallel_tools.parallel_analysis_interface 
>>>>> import
>>>>> \
>>>>>     File
>>>>>
>>>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/utilities/parallel_tools/parallel_analysis_interface.py", 
>>>>>
>>>>> line 39, in <module>
>>>>>       from yt.utilities.lib import \
>>>>>     File
>>>>>
>>>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/utilities/lib/__init__.py", 
>>>>>
>>>>> line 42, in <module>
>>>>>       from .write_array import *
>>>>> ImportError: No module named write_array
>>>>>
>>>>> I use the activate.csh and I don't know which version I was using 
>>>>> before.
>>>>> It
>>>>> wasn't that old though.
>>>>>
>>>>> -- 
>>>>> With kind regards,
>>>>> Seyit
>>>>>
>>>>>
>>>>> S. Hocuk
>>>>> Postdoctoral Researcher
>>>>> Kapteyn Astronomical Institute
>>>>> P.O. box 800
>>>>> 9700AV Groningen, the Netherlands
>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> yt-users mailing list
>>>>> yt-users at lists.spacepope.org
>>>>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
>>>>>
>>>> _______________________________________________
>>>> yt-users mailing list
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>>>
>>>
>>> -- 
>>> With kind regards,
>>> Seyit
>>>
>>>
>>> S. Hocuk
>>> Postdoctoral Researcher
>>> Kapteyn Astronomical Institute
>>> P.O. box 800
>>> 9700AV Groningen, the Netherlands
>>>
>
>


-- 
With kind regards,
Seyit


S. Hocuk
Postdoctoral Researcher
Kapteyn Astronomical Institute
P.O. box 800
9700AV Groningen, the Netherlands




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