[yt-users] After updating YT an error occurs

[Matthew Turk]

Hi Seyit,

That's pretty weird.  One more thing to try, and if it doesn't work,
I'd encourage you to download a new copy of the install script and run
it *in place* over top of the existing installation.  This will update
only those dependencies that need to be.

Here's the thing to try:

cd /net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/
python2.7 distribute_setup.py
python2.7 setup.py build_ext -i -f

On Thu, Sep 12, 2013 at 10:12 AM, Seyit Hocuk <seyit at astro.rug.nl> wrote:
> Hi Matt,
>
> The commands give me:
>
>
> python2.7 setup.py build_ext -i -f
> The required version of distribute (>=0.6.32) is not available,
> and can't be installed while this script is running. Please
> install a more recent version first, using
> 'easy_install -U distribute'.
>
> (Currently using distribute 0.6.21
> (/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/lib/python2.7/site-packages/distribute-0.6.21-py2.7.egg))
>
>
> python2.7 -c "import yt.utilities.lib.write_array"
>
> Traceback (most recent call last):
>   File "<string>", line 1, in <module>
>   File "yt/utilities/lib/__init__.py", line 42, in <module>
>
>     from .write_array import *
> ImportError: No module named write_array
>
> Best,
> Seyit
>
>
>
> On 09/12/2013 04:09 PM, Matthew Turk wrote:
>>
>> Hi Seyit,
>>
>> That's odd.  It should exist in there; the only thing I can think of
>> is that it may need a full recompilation.  Can you try:
>>
>> (activate your environment however, making sure your GNU modules or
>> whatever are loaded)
>> cd /net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/
>> python2.7 setup.py build_ext -i -f
>>
>> and then try again?  If you run into the issue once more, the output
>> from this specific command may help diagnose it:
>>
>> python2.7 -c "import yt.utilities.lib.write_array"
>>
>> Best,
>>
>> Matt
>>
>> On Thu, Sep 12, 2013 at 8:42 AM, Seyit Hocuk <seyit at astro.rug.nl> wrote:
>>>
>>> Hi,
>>>
>>> After I update my YT, I get this error when using my script. Probably
>>> some
>>> paths are wrong? I included the updater.log.
>>>
>>> ./ytmaps.py
>>> Traceback (most recent call last):
>>>    File "./ytmaps.py", line 5, in <module>
>>>      from yt.mods import *
>>>    File
>>>
>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/mods.py",
>>> line 60, in <module>
>>>      from yt.data_objects.api import \
>>>    File
>>>
>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/data_objects/api.py",
>>> line 31, in <module>
>>>      from grid_patch import \
>>>    File
>>>
>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/data_objects/grid_patch.py",
>>> line 35, in <module>
>>>      from yt.data_objects.data_containers import YTFieldData
>>>    File
>>>
>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/data_objects/data_containers.py",
>>> line 45, in <module>
>>>      from yt.data_objects.derived_quantities import GridChildMaskWrapper
>>>    File
>>>
>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/data_objects/derived_quantities.py",
>>> line 36, in <module>
>>>      from yt.utilities.parallel_tools.parallel_analysis_interface import
>>> \
>>>    File
>>>
>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/utilities/parallel_tools/parallel_analysis_interface.py",
>>> line 39, in <module>
>>>      from yt.utilities.lib import \
>>>    File
>>>
>>> "/net/ulubey/data/users/seyit/programmas/yt/yt-x86_64/src/yt-hg/yt/utilities/lib/__init__.py",
>>> line 42, in <module>
>>>      from .write_array import *
>>> ImportError: No module named write_array
>>>
>>> I use the activate.csh and I don't know which version I was using before.
>>> It
>>> wasn't that old though.
>>>
>>> --
>>> With kind regards,
>>> Seyit
>>>
>>>
>>> S. Hocuk
>>> Postdoctoral Researcher
>>> Kapteyn Astronomical Institute
>>> P.O. box 800
>>> 9700AV Groningen, the Netherlands
>>>
>>>
>>> _______________________________________________
>>> yt-users mailing list
>>> yt-users at lists.spacepope.org
>>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
>>>
>> _______________________________________________
>> yt-users mailing list
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>
>
>
> --
> With kind regards,
> Seyit
>
>
> S. Hocuk
> Postdoctoral Researcher
> Kapteyn Astronomical Institute
> P.O. box 800
> 9700AV Groningen, the Netherlands
>