[yt-users] SlicePlot script stuck

[j s oishi]

Hi JC,

the first thing that comes to mind is the matplotlib backend you are using
is trying to open a window remotely (even if it doesn't actually use it for
anything or ever even display it). Can you try doing

python script.py -d Agg

and see if that works remotely?

j


On Tue, Sep 3, 2013 at 11:18 AM, Jean-Claude Passy <jcpassy at gmail.com>wrote:

> Hi all,
>
> I am running a simple script using SlicePlot (see attached) on a small
> dataset (only ~ 200k cells). While it works without any problem on my
> laptop OS X 10.8.4, it gets stuck after saving the first slice (see below)
> on a remote Linux machine.
> I have run the script on the same data on both machines, have installed
> the latest dev version of yt, even removed the *.yt files. But it did not
> help.
>
> Does anyone have a suggestion?
>
> Thanks a lot,
>
> JC
>
>
>
> *
> -------------------------------------------------------------------------------------------------------------------------------------------------
> *
> *[ 7:48:12] seawolf2:$ python2.7 ~/Enzo/python/PlotEnzoDataMultiple.py 0
> 0 1.0 *
> *yt : [INFO     ] 2013-09-03 07:48:34,165 Parameters: current_time
>        = 0*
> *yt : [INFO     ] 2013-09-03 07:48:34,165 Parameters: domain_dimensions
>       = [32 32 32]*
> *yt : [INFO     ] 2013-09-03 07:48:34,166 Parameters: domain_left_edge
>        = [ 0.  0.  0.]*
> *yt : [INFO     ] 2013-09-03 07:48:34,167 Parameters: domain_right_edge
>       = [ 1.  1.  1.]*
> *yt : [INFO     ] 2013-09-03 07:48:34,168 Parameters:
> cosmological_simulation   = 0.0*
> *loading  DD0000/CE0000*
> *yt : [INFO     ] 2013-09-03 07:48:34,174 Getting the binary hierarchy*
> *Parsing Hierarchy100%
> ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
> Time: 00:00:00 *
> *yt : [INFO     ] 2013-09-03 07:48:34,181 Gathering a field list (this
> may take a moment.)*
> *yt : [INFO     ] 2013-09-03 07:48:34,220 Adding unknown field
> Grav_Potential to list of fields*
> *level   # grids        # cells       # cells^3*
> *----------------------------------------------*
> *  0          1           32768              31*
> *  1          1           13824              23*
> *  2          6           56320              38*
> *  3         14           85936              44*
> *----------------------------------------------*
> *            22          188848*
> *
> *
> *
> *
> *t = 0.00000000e+00 = 0.00000000e+00 s = 0.00000000e+00 years*
> *
> *
> *Smallest Cell:*
> *        Width: 4.431e-14 Mpc*
> *        Width: 4.431e-14 mpc*
> *        Width: 4.431e-11 kpc*
> *        Width: 4.431e-08 pc*
> *        Width: 3.906e-03 1*
> *        Width: 3.906e-03 aye*
> *        Width: 3.906e-03 unitary*
> *        Width: 9.139e-03 au*
> *        Width: 1.966e+00 rsun*
> *        Width: 8.495e+05 miles*
> *        Width: 1.367e+06 km*
> *        Width: 1.367e+11 cm*
> *yt : [INFO     ] 2013-09-03 07:48:34,600 xlim = 0.000000 1.000000*
> *yt : [INFO     ] 2013-09-03 07:48:34,600 ylim = 0.000000 1.000000*
> *yt : [INFO     ] 2013-09-03 07:48:34,600 Making a fixed resolution
> buffer of (Density) 800 by 800*
> *yt : [INFO     ] 2013-09-03 07:48:34,610 xlim = 0.000000 1.000000*
> *yt : [INFO     ] 2013-09-03 07:48:34,610 ylim = 0.000000 1.000000*
> *yt : [INFO     ] 2013-09-03 07:48:34,610 Making a fixed resolution
> buffer of (Density) 800 by 800*
> *yt : [INFO     ] 2013-09-03 07:48:34,619 Making a fixed resolution
> buffer of (Density) 800 by 800*
> *yt : [INFO     ] 2013-09-03 07:48:35,467 Getting particle_position_y
> using ParticleIO*
> *yt : [INFO     ] 2013-09-03 07:48:35,471 Getting particle_position_z
> using ParticleIO*
> *yt : [INFO     ] 2013-09-03 07:48:35,669 Getting particle_position_y
> using ParticleIO*
> *yt : [INFO     ] 2013-09-03 07:48:35,674 Getting particle_position_z
> using ParticleIO*
> *yt : [INFO     ] 2013-09-03 07:48:35,681 Making a fixed resolution
> buffer of (Density) 800 by 800*
> *yt : [INFO     ] 2013-09-03 07:48:35,881 Getting particle_position_y
> using ParticleIO*
> *yt : [INFO     ] 2013-09-03 07:48:35,885 Getting particle_position_z
> using ParticleIO*
> *yt : [INFO     ] 2013-09-03 07:48:35,892 Making a fixed resolution
> buffer of (Density) 800 by 800*
> *yt : [INFO     ] 2013-09-03 07:48:36,091 Getting particle_position_y
> using ParticleIO*
> *yt : [INFO     ] 2013-09-03 07:48:36,095 Getting particle_position_z
> using ParticleIO*
> *yt : [INFO     ] 2013-09-03 07:48:36,102 Saving plot
> Plots/Density/x-axis/CE0000_Slice_x_Density.png*
> *
> *
> *
> -------------------------------------------------------------------------------------------------------------------------------------------------
> *
>
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