[yt-users] Segmentation Fault Analyzing Gasoline (TIPSY) data with yt-3.0

Nathan Goldbaum nathan12343 at gmail.com
Fri Nov 15 11:24:52 PST 2013


Hi Samantha,

Do you have a sample dataset you can share?  Uploading to a personal
website works well, but you can also share a link from dropbox, google
drive, or some other similar service.

-Nathan


On Fri, Nov 15, 2013 at 10:57 AM, Samantha Benincasa
<benincsm at mcmaster.ca>wrote:

> Hello,
>
> I have been trying to analyze a TIPSY dataset using the new features in
> yt-3.0.  I am unable to do any analysis without getting a segmentation
> fault.
>
> Following the python notebook example for Gasoline, I read in the data
> using the command:
>
> ds = TipsyStaticOutput('test.00001',parameter_file='test.param')
>
> When I try to construct a plot collection, I am given the following error:
>
> YTDomainOverflow: Particle bounds [  1.25443703e-02  -5.12246704e+02
> -5.46726685e+02] and [  1.25443703e-02   5.65781677e+02   4.61335541e+02]
> exceed domain bounds [-0.5 -0.5 -0.5] and [ 0.5  0.5  0.5]
>
> If I instead try to manually set the domain bounds in the
> TipsyStaticOutput command,
>
> ds =
> TipsyStaticOutput('test.00001',parameter_file='test.param',domain_left_edge=[-57,-57,-57],domain_right_edge=[57,57,57])
>
> This gets rid of the domain boundary errors but I still receive a
> segmentation fault when I try to create the PlotCollection.  I am just
> trying to read the data in so I can make slices/projections in temperature
> and density.
>
> Thank you in advance for the help,
> Samantha
>
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