[yt-users] plot with source region and field parameters

david collins dcollins4096 at gmail.com
Thu May 9 15:20:29 PDT 2013


Hi, Everybody--

I have a field that I have defined that uses a field_parameter, but I don't
seem to be able to get it to work with a projection.

>>> region
AMRRegion (time0050): center=[ 0.5         0.03369141  0.68457031],
left_edge=[ 0.          0.00195312  0.63378906], right_edge=[ 1.
 0.06542969  0.73535156]

def linewidth(field,data):
    avg_vx = data.get_field_parameter('avg_vx')
    return (data['x-velocity']-avg_vx)**2
add_field('linewidth',function=linewidth,
validators=[ValidateParameter('avg_vx')])
avg_vx = 7
region.set_field_parameter('avg_vx',avg_vx)
print region['linewidth'].min()
print region.get_field_parameter('avg_vx')

which yields expected output,
1.15751883639e-07
7

But trying to make a projection of that source gives the error below.  Is
it obvious what I'm doing wrong? I can plot 'Density' just fine.

Thanks!

>>> proj = oober.pf.h.proj(2,'linewidth',source=region)
Initializing tree  0 /  4100%
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Time: 00:00:00
Traceback (most recent call last):

| ETA:  --:--:--
  File "<stdin>", line 1, in <module>
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/data_containers.py",
line 1758, in __init__
    self._refresh_data()
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/data_containers.py",
line 318, in _refresh_data
    self.get_data()
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/data_containers.py",
line 1859, in get_data
    self._add_level_to_tree(tree, level, fields)
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/data_containers.py",
line 1981, in _add_level_to_tree
    self._add_grid_to_tree(tree, grid, fields, zero_out, dls)
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/data_containers.py",
line 1925, in _add_grid_to_tree
    for fd in self._get_data_from_grid(grid, fields)]
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/data_containers.py",
line 93, in save_state
    tr = func(self, grid, field, *args, **kwargs)
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/data_containers.py",
line 2003, in _get_data_from_grid
    return [grid[field] * bad_points for field in fields]
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/grid_patch.py",
line 157, in __getitem__
    self.get_data(key)
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/grid_patch.py",
line 200, in get_data
    self._generate_field(field)
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/grid_patch.py",
line 132, in _generate_field
    self.pf.field_info[field].check_available(self)
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/field_info_container.py",
line 364, in check_available
    validator(data)
  File
"/nics/b/home/collins/local_2013_03_12/src/yt-hg/yt/data_objects/field_info_container.py",
line 440, in __call__
    raise NeedsParameter(doesnt_have)
yt.data_objects.field_info_container.NeedsParameter: (['avg_vx'])
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