[yt-users] Not able to read 2D BoxLib files
Nathan Goldbaum
nathan12343 at gmail.com
Tue Jul 23 22:29:30 PDT 2013
Hi Mani,
Take a look at this pull request from Matt:
https://bitbucket.org/yt_analysis/yt/pull-request/501/consolidation-of-boxlib-frontends
I suspect it will be a lot easier to write a frontend using this new
framework. I think there are still a few minor issues to work out (that's
why it's not in the codebase yet) but it should be a good place to start.
Andrew and Matt should have more information about this.
-Nathan
On Tue, Jul 23, 2013 at 10:27 PM, Mani Chandra <mc0710 at gmail.com> wrote:
> Hi Andrew,
>
> This is a code which I'm writing now using the BoxLib framework, so it is
> not exactly any of Nyx, Castro, Maestro or Orion. But I thought that since
> they all use BoxLib, I could simply use any of those frontends (although
> those frontends require a lot of parameters specific to those codes, which
> I just commented out).
>
> So I guess I'll have to write a frontend then.
>
> Thanks,
> Mani
>
>
> On Wed, Jul 24, 2013 at 12:21 AM, Andrew Myers <atmyers2 at gmail.com> wrote:
>
>> Hi Mani,
>>
>> To my knowledge, no one has ever used yt with 2D Orion data. I'm not sure
>> if any of the other BoxLib codes support 2D. I think the reason the Orion
>> code is getting called is because yt can tell your dataset uses BoxLib, but
>> not that it belongs to any of the other BoxLib-based codes (Nyx, Castro, or
>> Maestro), so it falls back to Orion.
>>
>> What simulation code generated this dataset? If it's not one of Nyx,
>> Castro, Maestro, or Orion, then you'll probably need to write a new
>> frontend for your data.
>>
>> -Andrew Myers
>>
>> On Tue, Jul 23, 2013 at 7:50 PM, Mani Chandra <mc0710 at gmail.com> wrote:
>>
>>> Hi Everyone,
>>>
>>> I'm trying to load a 2D BoxLib file into yt. It looks like it is using
>>> the same code as the Orion frontend and it fails with the following error:
>>>
>>> /home/mc/Downloads/yt/yt-x86_64/src/yt-hg/yt/data_objects/static_output.pyc
>>> in hierarchy(self)
>>> 191 raise RuntimeError("You should not instantiate
>>> StaticOutput.")
>>> 192 self._instantiated_hierarchy = self._hierarchy_class(
>>> --> 193 self, data_style=self.data_style)
>>> 194 return self._instantiated_hierarchy
>>> 195 h = hierarchy # alias
>>>
>>> /home/mc/Downloads/yt/yt-x86_64/src/yt-hg/yt/frontends/orion/data_structures.py
>>> in __init__(self, pf, data_style)
>>> 119 self.data_style = data_style
>>> 120
>>> --> 121
>>> self.readGlobalHeader(header_filename,self.parameter_file.paranoid_read) #
>>> also sets up the grid objects
>>> 122 self.__cache_endianness(self.levels[-1].grids[-1])
>>> 123 AMRHierarchy.__init__(self,pf, self.data_style)
>>>
>>> /home/mc/Downloads/yt/yt-x86_64/src/yt-hg/yt/frontends/orion/data_structures.py
>>> in readGlobalHeader(self, filename, paranoid_read)
>>> 194 self.dimension = int(self.__global_header_lines[counter])
>>> 195 if self.dimension != 3:
>>> *--> 196 raise RunTimeError("Orion must be in 3D to use
>>> yt.")*
>>> 197 counter += 1
>>> 198 self.Time = float(self.__global_header_lines[counter])
>>>
>>> Has anyone managed to load 2D Orion files into yt?
>>>
>>> Thanks,
>>> Mani
>>>
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