[yt-users] Installing yt on stampede

Matthew Turk matthewturk at gmail.com
Sun Jan 13 12:32:28 PST 2013


Hi Munier,

uuid-dev is required for ZeroMQ, which is only required if you want to
build and use the IPython notebook.  If you turn INST_0MQ to 0 in the
install_script.sh it will sidestep this, but the notebook will not be
available.  Alternately you can install uuid-dev or ask Stampede
consultants to do so.  My guess is that since the library is
relatively tiny, broadly useful and pretty commonplace, they'd be open
to that.

-Matt

On Sun, Jan 13, 2013 at 3:29 PM, Munier Azzam Salem
<msalem at astro.columbia.edu> wrote:
> sorry, some details that might be important:
>
> gcc (GCC) 4.4.6 20120305 (Red Hat 4.4.6-4)
> running in bash
>
>
> On Sun, Jan 13, 2013 at 3:26 PM, Munier Azzam Salem
> <msalem at astro.columbia.edu> wrote:
>>
>> Hi yt,
>>
>>      I've just tried installing yt on the new TACC Stampede system (just a
>> basic build of the stable release). Things were going quite smoothly, until
>> ...
>>
>> Installing BZLIB
>> Installing ZLIB
>> Installing PNG
>> Installing FreeType2
>> Installing HDF5
>> Installing SQLite3
>> Installing Python.  This may take a while, but don't worry.  YT loves you.
>> Setting YT_DIR=/home1/01686/msalem/yt-x86_64/src/yt-hg/
>> Installing distribute
>> Installing pip
>> Installing numpy-1.6.1 (arguments: 'numpy-1.6.1')
>> Installing matplotlib-1.1.0 (arguments: 'matplotlib-1.1.0')
>> Installing ZeroMQ
>> ********************************************
>>         FAILURE REPORT:
>> ********************************************
>>
>> checking whether we are using Intel C++ compiler... no
>> checking whether we are using Sun Studio C++ compiler... no
>> checking whether we are using clang C++ compiler... no
>> checking whether we are using gcc >= 4 C++ compiler... yes
>> checking whether to enable debugging information... no
>> checking whether to enable code coverage... no
>> checking for pthread_create in -lpthread... yes
>> checking for sem_init in -lrt... yes
>> checking for uuid_generate in -luuid... no
>> configure: error: cannot link with -luuid, install uuid-dev.
>>
>> ********************************************
>> ********************************************
>> Failure.  Check /home1/01686/msalem/yt-x86_64/yt_install.log.  The last 10
>> lines are above.
>>
>> Does anyone know what's going wrong here? Thanks!
>>
>>       best,
>>         Munier
>> --
>> Munier A. Salem // 845.489.6450
>
>
>
>
> --
> Munier A. Salem // 845.489.6450
>
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