[yt-users] HaloProfiler troubles

Nathan Goldbaum nathan12343 at gmail.com
Thu Dec 5 08:37:16 PST 2013


Note that the fortran kdtree will only be built if you have both gfortran
and forthon installed.

On Thursday, December 5, 2013, Britton Smith wrote:

> Hi Claire,
>
> It's tough to tell for certain, but if you are working with an Enzo
> dataset, the HaloProfiler usually looks for the halo catalog file to be in
> the directory of the dataset itself.  There might be a problem if you are
> using a dataset where all the data is in a single file as the HaloProfiler
> makes an assumption that each dataset is contained within its own
> directory.  If this is the case, let me know and we should be able to fix
> this issue.
>
> The second issue comes from not having the fortran kdtree installed with
> your yt installation.  It should be install by default now, so you may have
> an out of date installation.  In that case, you may want to run "yt update
> --all" to update your yt install stack.
>
> Britton
>
>
> On Wed, Dec 4, 2013 at 6:56 PM, Claire Kopenhafer <clairekope at gmail.com<javascript:_e({}, 'cvml', 'clairekope at gmail.com');>
> > wrote:
>
>> Hello, my name is Claire. Recently, I've been having some very odd
>> trouble with HaloProfiler.
>>
>> When I try to initiate HaloProfiler, it cannot open HopAnalysis.out, even
>> when I feed it the full file path. This has happened on two different
>> systems, but only with one particular data set!
>>
>> HaloProfiler then goes on to run HaloFinder, which would be totally cool
>> except that that fails, too. Parallel_hop_interface.py cannot open fKD.
>>
>> Any ideas? Thanks!!
>>
>> _______________________________________________
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>>
>>
>
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