[yt-users] yt installation problem in fedora 14

[Prakash Sarkar]

Hope it helps .
[prakash at shashank Desktop]$ locate complex.h
/home/prakash/Downloads/gsl-1.9/complex/gsl_complex.h
/home/prakash/Downloads/gsl-1.9/fft/gsl_dft_complex.h
/home/prakash/Downloads/gsl-1.9/fft/gsl_fft_complex.h
/home/prakash/Downloads/gsl-1.9/fft/gsl_fft_halfcomplex.h
/home/prakash/Downloads/gsl-1.9/vector/gsl_vector_complex.h
/usr/include/complex.h
/usr/include/boost/accumulators/numeric/functional/complex.hpp
/usr/include/boost/config/no_tr1/complex.hpp
/usr/include/boost/math/complex.hpp
/usr/include/boost/serialization/complex.hpp
/usr/include/boost/tr1/complex.hpp
/usr/include/boost/type_traits/is_complex.hpp
/usr/include/boost/typeof/std/complex.hpp
/usr/include/c++/4.5.1/complex.h
/usr/include/c++/4.5.1/tr1/complex.h
/usr/lib64/R/library/base/html/complex.html
/usr/local/include/complex.h
/usr/local/matlab/toolbox/rtw/rtwdemos/html/rtwdemo_complex.html
/usr/local/yt/yt-x86_64/src/hdf5-1.8.7/tools/testfiles/tcompound_complex.h5
/usr/local/yt/yt-x86_64/src/hdf5-1.8.7/tools/testfiles/tcompound_complex.h5.xml
/usr/share/doc/PyQt4-devel-4.8.3/html/qstyleoptioncomplex.html
/usr/share/doc/libstdc++-docs-4.5.1/html/manual/complex.html
/usr/share/doc/qtscriptbindings-0.1.0/doc/qstyleoptioncomplex.html
/usr/share/man/man0p/complex.h.0p.gz
[prakash at shashank Desktop]$


On Fri, Feb 24, 2012 at 4:48 PM, Matthew Turk <matthewturk at gmail.com> wrote:

> Hi Prakash,
>
> Looking over the install log, it looks to me like there's a type that
> uses 'complex' but GCC doesn't know complex is a type specifier.  By
> default, numpy assumes you have complex.h ( see numpy/core/setup.py ).
>  For me, complex.h is located in /usr/include , but I don't know where
> it is located on your system -- in fact, there may be an additional
> complex.h that does not correctly define things (as the SAGE project
> found, in bug 8278) that is getting in the way.  Let me know what you
> can find,
>
> Matt
>
> PS Welcome to yt-users!
>
> On Fri, Feb 24, 2012 at 4:30 AM, Prakash Sarkar
> <cyclone.turner at gmail.com> wrote:
> > While Installing yt through installation script it fails while installing
> > numpy-1.6.1 in fedora 14.
> > the output of the script is shown below
> >
> > [root at shashank yt]# bash install_script.sh
> >
> > ========================================================================
> >
> > Hi there!  This is the YT installation script.  We're going to download
> > some stuff and install it to create a self-contained, isolated
> > environment for YT to run within.
> >
> > Inside the installation script you can set a few variables.  Here's what
> > they're currently set to -- you can hit Ctrl-C and edit the values in
> > the script if you aren't such a fan.
> >
> > INST_ZLIB       = 1 so I will  be installing zlib
> > INST_BZLIB      = 1 so I will  be installing bzlib
> > INST_PNG        = 1 so I will  be installing libpng
> > INST_FTYPE      = 1 so I will  be installing freetype2
> > INST_SQLITE3    = 1 so I will  be installing SQLite3
> > INST_FORTHON    = 1 so I will  be installing Forthon (for Halo Finding,
> etc)
> > INST_HG         = 1 so I will  be installing Mercurial
> > INST_ENZO       = 1 so I will  be checking out Enzo
> >
> > HDF5_DIR is not set, so I will be installing HDF5
> >
> > Installation will be to
> >   /usr/local/yt/yt-x86_64
> >
> > and I'll be logging the installation in
> >   /usr/local/yt/yt-x86_64/yt_install.log
> >
> > I think that about wraps it up.  If you want to continue, hit enter.
> > If you'd rather stop, maybe think things over, even grab a sandwich,
> > hit Ctrl-C.
> >
> > ========================================================================
> >
> > [hit enter]
> >
> > Awesome!  Here we go.
> >
> > Using wget
> > Downloading HDF5
> > Downloading hdf5-1.8.7.tar.gz from yt-project.org
> > Downloading zlib-1.2.3.tar.bz2 from yt-project.org
> > Downloading bzip2-1.0.5.tar.gz from yt-project.org
> > Downloading libpng-1.2.43.tar.gz from yt-project.org
> > Downloading freetype-2.4.4.tar.gz from yt-project.org
> > Downloading sqlite-autoconf-3070500.tar.gz from yt-project.org
> > Downloading Python-2.7.2.tgz from yt-project.org
> > Downloading numpy-1.6.1.tar.gz from yt-project.org
> > Downloading matplotlib-1.1.0.tar.gz from yt-project.org
> > Downloading mercurial-2.0.tar.gz from yt-project.org
> > Downloading ipython-0.10.tar.gz from yt-project.org
> > Downloading h5py-2.0.1.tar.gz from yt-project.org
> > Downloading Cython-0.15.1.tar.gz from yt-project.org
> > Downloading Forthon-0.8.5.tar.gz from yt-project.org
> > Downloading ext-3.3.2.zip from yt-project.org
> > Downloading ext-slate-110328.zip from yt-project.org
> > Downloading PhiloGL-1.4.2.zip from yt-project.org
> > Installing Mercurial.
> > Setting YT_DIR=/usr/local/yt/yt-x86_64/src/yt-hg/
> > Installing distribute
> > Installing pip
> > Installing numpy-1.6.1 (arguments: 'numpy-1.6.1')
> > Failure.  Check /usr/local/yt/yt-x86_64/yt_install.log.
> > [root at shashank yt]#
> >
> >
> >
> > I have attached the yt_install.log file
> > Please help
> >
> > thanks in advance
> >
> > Prakash
> >
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