[yt-users] YT on NASA Pleiades

[Sam Skillman]

Just an update, this seems to have been fixed in
https://bitbucket.org/yt_analysis/yt/changeset/68227951f9b3/

Sam

On Thu, Nov 17, 2011 at 2:05 PM, Sam Skillman <samskillman at gmail.com> wrote:

> Thanks, and then what about
> h5ls filename/logical\ runtime\ parameters
> It seems like it's getting an int instead of a string when searching
> through the parameter list.  If you have time and can log on to IRC I can
> talk you through some debugging with ipython that will probably speed this
> up quite a bit.
>
> Thanks and sorry for the trouble,
> Sam
>
>
> On Thu, Nov 17, 2011 at 1:55 PM, James Guillochon <jfg at ucolick.org> wrote:
>
>> Hi Sam,
>>
>> So I just copied over a dataset that is working with YT on our local
>> cluster, and I get the same result when trying to load that file on NASA
>> Pleiades. The simulation is not cosmological. Here are the results of h5ls:
>>
>> http://paste.yt-project.org/show/1948/
>>
>>
>> On Thu, Nov 17, 2011 at 12:45 PM, Sam Skillman <samskillman at gmail.com>wrote:
>>
>>> Hi John,
>>>
>>> That'd be great, as I neither have access to Pleiades or a
>>> representative FLASH dataset.  Please let us know how this ends up.  Also,
>>> James, if you could still send over the results of h5ls filename and a
>>> whether or not it's a cosmological sim, that'd be awesome.
>>>
>>> Thanks,
>>> Sam
>>>
>>>
>>> On Thu, Nov 17, 2011 at 11:44 AM, John ZuHone <
>>> jzuhone at milkyway.gsfc.nasa.gov> wrote:
>>>
>>>> James, Sam,
>>>>
>>>> I've seen this before too on Pleiades but have never figured it out. I
>>>> am not running cosmological simulations. I would be willing to try to
>>>> reproduce it and help debug it, but I'm not sure if I can get to it today.
>>>>
>>>> Best,
>>>>
>>>> John Z
>>>>
>>>> On Nov 17, 2011, at 1:26 PM, Sam Skillman wrote:
>>>>
>>>> Hi James,
>>>>
>>>> This somewhat difficult to see what is going on.  Could you show us the
>>>> results of h5ls filename?  I don't have a FLASH dataset to test things out
>>>> on.  Also, is this a cosmological sim?  Finally, do you have a dataset
>>>> similar to that one on different machine that does load?  I've got some
>>>> ideas but it'll be tough to test.
>>>>
>>>> If you're around and want to work through this a bit on IRC, i'll be
>>>> around off and on today.
>>>>
>>>> Sam
>>>>
>>>> On Wed, Nov 16, 2011 at 7:00 PM, James Guillochon <jfg at ucolick.org>wrote:
>>>>
>>>>> I am getting a failure in the "load" statement when trying to run YT
>>>>> on NASA Pleiades. It seems that it is having problems with the numpy
>>>>> package. Here is the traceback:
>>>>>
>>>>> http://paste.yt-project.org/show/1947/
>>>>>
>>>>> My script is just:
>>>>>
>>>>> from yt.mods import *
>>>>>> load('filename')
>>>>>
>>>>>
>>>>> Any ideas?
>>>>>
>>>>> --
>>>>> James Guillochon
>>>>> Department of Astronomy & Astrophysics
>>>>> University of California, Santa Cruz
>>>>> jfg at ucolick.org
>>>>>
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>>
>>
>> --
>> James Guillochon
>> Department of Astronomy & Astrophysics
>> University of California, Santa Cruz
>> jfg at ucolick.org
>>
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