[yt-users] error when running on cluster nodes
Tsz Ka Li
tszkali2 at illinois.edu
Wed Feb 16 15:54:34 PST 2011
Hi all,
I run into an error which occurs when I submit a yt script to run on
cluster nodes. The script runs successfully from the command line
though, and I am NOT running MPI here. The error is as follows:
/Traceback (most recent call last):
File "MergerTree.py", line 1, in <module>
from yt.mods import *
File "/turing/home/tszkali2/yt-ppc64/src/yt-hg/yt/mods.py", line 92,
in <module>
from yt.visualization.api import \
File
"/turing/home/tszkali2/yt-ppc64/src/yt-hg/yt/visualization/api.py", line
34, in <module>
from plot_collection import \
File
"/turing/home/tszkali2/yt-ppc64/src/yt-hg/yt/visualization/plot_collection.py",
line 26, in <module>
from matplotlib import figure
File
"/turing/home/tszkali2/yt-ppc64/lib/python2.6/site-packages/matplotlib/figure.py",
line 16, in <module>
import artist
File
"/turing/home/tszkali2/yt-ppc64/lib/python2.6/site-packages/matplotlib/artist.py",
line 6, in <module>
from transforms import Bbox, IdentityTransform, TransformedBbox,
TransformedPath
File
"/turing/home/tszkali2/yt-ppc64/lib/python2.6/site-packages/matplotlib/transforms.py",
line 34, in <module>
from matplotlib._path import affine_transform
ImportError:
/turing/home/tszkali2/yt-ppc64/lib/python2.6/site-packages/matplotlib/_path.so:
undefined symbol:
_ZZN2Py15PythonExtensionINS_22ExtensionModuleBasePtrEE9behaviorsEvE1p/
Apparently it is related to matplotlib. I tried to do something similar
to the instructions on the wiki for CrayXT5 Installation
(http://yt.enzotools.org/wiki/CrayXT5Installation) in the section
'Running on a compute node', but I still got the same error.
Does anyone have ideas on what this means? I appreciate any help from you.
Thanks,
Tsz Ka
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