[yt-users] passing parameters to 'ray'
Elizabeth Tasker
taskere at mcmaster.ca
Thu Aug 11 13:53:25 PDT 2011
Hi Sam,
OK, I've succeeded in breaking your improved script. When you try and
set both parameter and spatial validators, the code stops recognising
them. So:
add_field("RayTest", function=_RayTest,
validators=[ValidateParameter("disk_vector")])
works while
add_field("RayTest", function=_RayTest,
validators=[ValidateParameter("disk_vector"),
ValidateParameter("disk_center"), ValidateSpatial(1, ["x-velocity",
"y-velocity", "z-velocity", "x", "y", "z"])])
does not.Which it why it didn't work in my longer script.
Perhaps I've put the format in incorrectly?
Elizabeth
Elizabeth Tasker wrote:
> Hi Sam,
>
> Thank you -- my test script now works fine but I've managed to break
> my longer one so completely it's become impossible to test anything.
> Oops. However, I think when I tried the method below originally, I put
> the set_field_parameters in the wrong place, which would explain why
> they didn't work.
>
> Thanks loads for the example.
>
> Elizabeth
>
> Sam Skillman wrote:
>> Hi Elizabeth,
>>
>> So the problem is that when you add_field and ask to validate the
>> height_vector, it doesn't exist yet. I believe you can get the
>> desired behavior with:
>>
>> from yt.mods import *
>>
>> def _RayTest(field, data):
>>
>> center = data.get_field_parameter("center")
>> h_vec = na.array(data.get_field_parameter("height_vector"))
>>
>> print "center :", center, "h_vec: ", h_vec
>>
>> return data["Density"]
>>
>> add_field("RayTest", function=_RayTest)
>>
>> # Grab data
>> fn = "GravPotential/DD0301/GT_BTAccel_256AMR4_PeHeat_sf5_SNe_0301"
>> pf = load(fn)
>> ray1 = pf.h.ray((2.0, 2.0 ,2.0), (12.0, 12.0, 12.0))
>> ray1.set_field_parameter('height_vector',na.array([0.,0.,1.]))
>> ray1.set_field_parameter('center',[0.5]*3)
>> ray1["RayTest"]
>>
>> When I run this I get: center : [0.5, 0.5, 0.5] h_vec: [ 0. 0. 1.]
>>
>> I'm not sure what dd was in your dd.center since dd wasn't defined in
>> that script, but you should be able to set center to whatever you
>> want here. I also changed density to Density.
>> Best,
>> Sam
>>
>> On Wed, Aug 10, 2011 at 9:36 AM, Elizabeth Tasker
>> <taskere at mcmaster.ca <mailto:taskere at mcmaster.ca>> wrote:
>>
>> Hi Matt,
>>
>> I think this script explains what I mean. When I run it, I get:
>>
>> /1/home/taskere/yt/yt/data_objects/field_info_container.py in
>> __call__(self, data)
>> 357 doesnt_have.append(p)
>> 358 if len(doesnt_have) > 0:
>> --> 359 raise NeedsParameter(doesnt_have)
>> 360 return True
>> 361
>>
>> NeedsParameter: (['height_vector'])
>>
>>
>> As a side note, I think 'ray' sets its own value for the field
>> parameter, "center", making it the start of the ray. If that's
>> true, does it have problems for calling radius? e.g.
>>
>> ray["Radius"]
>>
>> where radius would need to be the center of the object, not
>> necessarily the start of the ray? (This particular issue wouldn't
>> affect me, but I thought it might bite someone later).
>>
>> Elizabeth
>>
>>
>>
>> Matthew Turk wrote:
>>
>>
>> Hi Elizabeth,
>>
>> Could you elaborate on what you mean, and provide an example
>> script?
>>
>> Thanks,
>>
>> -Matt
>>
>> On Aug 10, 2011 7:22 AM, "Elizabeth Tasker"
>> <taskere at mcmaster.ca <mailto:taskere at mcmaster.ca>
>> <mailto:taskere at mcmaster.ca <mailto:taskere at mcmaster.ca>>>
>> wrote:
>> > Hi,
>> >
>> > I'm having problems passing parameters to a ray object. I'm
>> trying:
>> >
>> > ray1 = pf.h.ray( com[c], com[nearestcore], field_parameters =
>> > {'height_vector':na.array([0,0,1]), 'center':dd.center})
>> > Omega0 = ray1["Omega"]
>> >
>> > and I also tried out:
>> >
>> > ray1.set_field_parameter("height_vector", na.array([0,0,1]))
>> > ray1.set_field_parameter("center", dd.center)
>> >
>> > But it can't recognise them.
>> >
>> > Elizabeth
>> > _______________________________________________
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