[yt-users] parallelHOP problem, did I break python?

gso at physics.ucsd.edu gso at physics.ucsd.edu
Fri Oct 29 15:10:03 PDT 2010


I guess when you break things twice you fix them!  The new yt2.0 I
installed has problems, but when I went back and did sudo python setup.py
install in my old yt that was having parallel hop problem, the script that
was complaining is working again!

I checked the version with SVN info
gso:yt-trunk-svn gso$ svn info
Path: .
URL: http://svn.enzotools.org/yt/trunk
Repository Root: http://svn.enzotools.org/yt
Repository UUID: a79caf2f-f534-0410-a086-a967bc00d294
Revision: 1811
Node Kind: directory
Schedule: normal
Last Changed Author: mturk
Last Changed Rev: 1811
Last Changed Date: 2010-08-24 18:56:59 -0700 (Tue, 24 Aug 2010)

>From the URL:...was I suppose to do
>hg branch trunk
instead of just
>hg branch
in the yt2.0?

So since it was last updated by Matt on 24 Aug 2010, I assume I'm using
the latest instead of the 1.7 right?  Sorry for all the hassle...

From
G.S.

> Did the
>>hg clone
>>hg branch
>>cd yt2.0
>>python setup.py install
> copied Forthon insize yt2.0
>>python setup.py install inside the new Forthon directory
>>cd yt2.0
>>python setup.py install
>
> but now inside python when I try to import yt.mods I get
>>>> from yt.mods import *
> Traceback (most recent call last):
>   File "<stdin>", line 1, in <module>
>   File
> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/yt-2.0dev-py2.6-macosx-10.6-intel.egg/yt/mods.py",
> line 74, in <module>
>     from yt.analysis_modules.halo_finding.api import \
>   File
> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/yt-2.0dev-py2.6-macosx-10.6-intel.egg/yt/analysis_modules/halo_finding/api.py",
> line 31, in <module>
>     from halo_objects import \
>   File
> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/yt-2.0dev-py2.6-macosx-10.6-intel.egg/yt/analysis_modules/halo_finding/halo_objects.py",
> line 45, in <module>
>     from parallel_hop.parallel_hop_interface import \
>   File
> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/yt-2.0dev-py2.6-macosx-10.6-intel.egg/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py",
> line 36
>     free_tree, find_chunk_nearest_neighbors
>     ^
> IndentationError: unexpected indent
>>>>
>
> From
> G.S.
>
>
>> Geoffrey,
>>
>>> 4.  So can someone point me to a 2.0 installation script?
>>> Thanks a bunch.
>>
>>
>> I think the simplest way to get this is to make a new copy of yt in your
>> src/ directory. Do something like this:
>>
>> $ hg clone http://hg.enzotools.org/yt/ yt-2
>>
>>
>> and then go into yt-2, and copy the 'hdf5.cfg' file from the yt source
>> you
>> have been using in here. Make sure you're using the correct branch "yt":
>>
>> $ hg branch
>> yt
>>
>> And then do:
>>
>> $ python setup.py install
>>
>> You'll have to "make" the fKDpy.so file again, and then do the command
>> above again.
>>
>> Remember, this is the branch that is under active development and has
>> many
>> changes compared to older versions of yt. Some of your scripts may not
>> work without modification.
>>
>>
>> Good luck!
>>
>>
>> Stephen Skory
>> s at skory.us
>> http://stephenskory.com/
>> 510.621.3687 (google voice)
>> _______________________________________________
>> yt-users mailing list
>> yt-users at lists.spacepope.org
>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
>>
>
>
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