[yt-users] adapting multi plot - 3 plots

Elizabeth Harper-Clark h-clark at astro.utoronto.ca
Thu Nov 4 08:56:34 PDT 2010


Hi all,

I have adapted the multi plot script from the cookbook an dit all works as
long as I only want 2 plot. When I try to increase to three I get:

[h-clark at tpb4 my_scripts]$ python2.6 MultiPlot.py GMCsetup3
1.0 0.714285714286
yt         INFO       2010-11-04 11:53:30,115 Created plot collection with
default plot-center = [0.51190100000000005, 0.45233099999999998, 0.434998]
yt         INFO       2010-11-04 11:53:30,127 Getting the binary hierarchy
yt         INFO       2010-11-04 11:53:30,160 Finished with binary hierarchy
reading
yt         INFO       2010-11-04 11:53:30,253 Adding PotentialField to list
of fields
yt         INFO       2010-11-04 11:53:30,254 Adding AccelerationField1 to
list of fields
yt         INFO       2010-11-04 11:53:30,254 Adding HeII_gamma to list of
fields
yt         INFO       2010-11-04 11:53:30,254 Adding RadAccel1 to list of
fields
yt         INFO       2010-11-04 11:53:30,254 Adding RadAccel2 to list of
fields
yt         INFO       2010-11-04 11:53:30,255 Adding RadAccel3 to list of
fields
yt         INFO       2010-11-04 11:53:30,255 Adding HI_kph to list of
fields
yt         INFO       2010-11-04 11:53:30,255 Adding HeII_kph to list of
fields
yt         INFO       2010-11-04 11:53:30,255 Adding HI_gamma to list of
fields
[0 0 0]
yt         INFO       2010-11-04 11:53:31,962 Added slice of Density at x =
0.511901 with 'center' = [0.51190100000000005, 0.45233099999999998,
0.434998]
yt         INFO       2010-11-04 11:53:33,265 Added slice of Temperature at
x = 0.511901 with 'center' = [0.51190100000000005, 0.45233099999999998,
0.434998]
yt         INFO       2010-11-04 11:53:34,933 Added slice of HII_Fraction at
x = 0.511901 with 'center' = [0.51190100000000005, 0.45233099999999998,
0.434998]
Traceback (most recent call last):
  File "MultiPlot.py", line 34, in <module>
    fig.savefig(frame_template % (sys.argv[-1],ax,n))
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/figure.py",
line 1032, in savefig
    self.canvas.print_figure(*args, **kwargs)
  File
"/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/backend_bases.py",
line 1476, in print_figure
    **kwargs)
  File
"/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/backends/backend_agg.py",
line 358, in print_png
    FigureCanvasAgg.draw(self)
  File
"/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/backends/backend_agg.py",
line 314, in draw
    self.figure.draw(self.renderer)
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/artist.py",
line 46, in draw_wrapper
    draw(artist, renderer, *args, **kwargs)
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/figure.py",
line 773, in draw
    for a in self.axes: a.draw(renderer)
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/artist.py",
line 46, in draw_wrapper
    draw(artist, renderer, *args, **kwargs)
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/axes.py",
line 1701, in draw
    im.draw(renderer)
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/artist.py",
line 46, in draw_wrapper
    draw(artist, renderer, *args, **kwargs)
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/image.py",
line 237, in draw
    im = self.make_image(renderer.get_image_magnification())
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/image.py",
line 182, in make_image
    x = self.to_rgba(self._A, self._alpha)
  File "/home/h-clark/YT/lib/python2.6/site-packages/matplotlib/cm.py", line
167, in to_rgba
    x = self.cmap(x, alpha=alpha, bytes=bytes)
TypeError: 'NoneType' object is not callable


*My Script is:*

from yt.mods import *
import matplotlib.colorbar as cb

orient = 'horizontal'
frame_template = "aaSN/%s/multiplot_%01i_%04i"
centre = (0.511901,  0.452331,  0.434998)
ax = 0
ss = 1
n = 134

pf = load("SciNet/%s/DD%04i/data%04i" % (sys.argv[-1],n, n))
fig, axes, colorbars = get_multi_plot( 3, 1, colorbar=orient, bw = 4)
pc = PlotCollection(pf, center=centre)

p = pc.add_slice("Density", ax, figure = fig, axes = axes[0][0],
use_colorbar=False)
p.set_cmap("bds_highcontrast")
p = pc.add_slice("Temperature", ax, figure=fig, axes=axes[0][1],
use_colorbar=False)
p.set_cmap("hot")
p = pc.add_slice("HII_Fraction", ax, figure=fig, axes=axes[0][2],
use_colorbar=False)
p.set_cmap("cold")

p.set_width(ss, 'pc')
for p, cax in zip(pc.plots, colorbars):
    cbar = cb.Colorbar(cax, p.image, orientation=orient)
    p.colorbar = cbar
    p._autoset_label()
fig.savefig(frame_template % (sys.argv[-1],ax,n))



What am I missing?

many thanks,

Libby

-- 
Elizabeth Harper-Clark MA MSci
PhD Candidate, Canadian Institute for Theoretical Astrophysics, UofT
Sciences and Engineering Coordinator, Teaching Assistants' Training Program,
UofT

www.astro.utoronto.ca/~h-clark <http://www.astro.utoronto.ca/%7Eh-clark>
h-clark at cita.utoronto.ca
Astronomy office phone: +1-416-978-5759
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