[yt-users] yt install script on NICS Kraken

David A. Ventimiglia ventimig at msu.edu
Mon May 11 12:34:02 PDT 2009


Hello,

I'm new to yt, so I apologize if I'm doing something dumb.  But, I'm
trying to install yt on Kraken and am having a little trouble.
install_script.sh appeared to run fine, but when I run iyt I get these
errors:

yt.lagos   WARNING    2009-05-11 15:09:47,175 No HDF4 support
yt.lagos   WARNING    2009-05-11 15:09:47,185 No h5py. Data serialization will fail.
Traceback (most recent call last):
  File "/nics/b/home/ventimig/scratch/yt-x86_64/bin/iyt", line 7, in <module>
    execfile(__file__)
  File "/nics/b/home/ventimig/scratch/yt-x86_64/src/yt-trunk-svn/scripts/iyt", line 3, in <module>
    from yt.mods import *
  File "/nics/b/home/ventimig/scratch/yt-x86_64/src/yt-trunk-svn/yt/mods.py", line 32, in <module>
    import yt.lagos as lagos
  File "/nics/b/home/ventimig/scratch/yt-x86_64/src/yt-trunk-svn/yt/lagos/__init__.py", line 74, in <module>
    import HDF5LightReader
ImportError: libpgc.so: cannot open shared object file: No such file or directory

Evidently it can't find one of the Portland Group libraries, but I
thought all that'd be taken care of by having the PrgEnv-pgi module
loaded.  What am I doing wrong?  Thanks!

Best,
David Ventimiglia
ventimig at msu.edu





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