[yt-users] yt on verne

[Stephen Skory]

Hi,

I am trying to build yt on the new analysis machine at NICS, called Verne. I am using the PE-gnu environment, and I set export CC=cc;export CXX=CC, like on Kraken. During the numpy step, I am getting the error below. It's confusing because it doesn't like any of the libraries here, including libm, but I can see from the yt_install.log that it's linked to -lm before without complaining. Thoughts?

Thanks!

building 'numpy.linalg.lapack_lite' extension
compiling C sources
C compiler: cc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC

creating build/temp.linux-x86_64-2.6/numpy/linalg
compile options: '-DNO_ATLAS_INFO=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.6/numpy/core/include/numpy -Inumpy/core/src -Inumpy/core/include -I/nics/c/home/sskory/yt-verne/include/python2.6 -c'
cc: numpy/linalg/python_xerbla.c
cc: numpy/linalg/lapack_litemodule.c
/usr/bin/gfortran -Wall -L/nics/c/home/sskory/yt-verne/lib/ -L/nics/c/home/sskory/yt-verne/lib64/ build/temp.linux-x86_64-2.6/numpy/linalg/lapack_litemodule.o build/temp.linux-x86_64-2.6/numpy/linalg/python_xerbla.o -L/usr/lib -llapack -lblas -lgfortran -o build/lib.linux-x86_64-2.6/numpy/linalg/lapack_lite.so
/usr/bin/ld: skipping incompatible /usr/lib/liblapack.so when searching for -llapack
/usr/bin/ld: skipping incompatible /usr/lib/liblapack.a when searching for -llapack
/usr/bin/ld: skipping incompatible /usr/lib/libblas.so when searching for -lblas
/usr/bin/ld: skipping incompatible /usr/lib/libblas.a when searching for -lblas
/usr/bin/ld: skipping incompatible /usr/lib/libm.so when searching for -lm
/usr/bin/ld: skipping incompatible /usr/lib/libm.a when searching for -lm
/usr/bin/ld: skipping incompatible /usr/lib/libm.so when searching for -lm
/usr/bin/ld: skipping incompatible /usr/lib/libm.a when searching for -lm
/usr/bin/ld: skipping incompatible /usr/lib/libc.so when searching for -lc
/usr/bin/ld: skipping incompatible /usr/lib/libc.a when searching for -lc
 

 _______________________________________________________
sskory at physics.ucsd.edu           o__  Stephen Skory
http://physics.ucsd.edu/~sskory/ _.>/ _Graduate Student
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