[yt-users] Ranger and hdf5 versions

Britton Smith brittonsmith at gmail.com
Mon Jun 8 15:50:47 PDT 2009


I've also found that manually editing LD_LIBRARY_PATH on ranger doesn't work
right with enzo.  My work-around is to alias a couple module loads.

For enzo, I have this:
alias enzo_modules 'module unload pgi/7.2-5 ; module load intel/10.1 ;
module unload mvapich/1.0.1 ; module load mvapich-devel/1.0 ; module load
acml/4.1.0 ; module load subversion/1.5.1 ; module load hdf5/1.6.5'

For using yt, I use this:
alias yt_path 'module unload pgi/7.2-5 ; module load intel/10.1 ; module
unload mvapich/1.0.1 ; module load mvapich-devel/1.0 ; setenv PATH
/share/home/00688/tg458377/local/bin:${PATH} ; setenv PYTHONPATH
/share/home/00688/tg458377/local/lib/python2.6/site-packages ; setenv
LD_LIBRARY_PATH /share/home/00688/tg458377/local/lib/:${LD_LIBRARY_PATH}'

It's not perfect, but it works ok.

Britton

On Mon, Jun 8, 2009 at 1:02 PM, Carolyn Peruta <perutaca at msu.edu> wrote:

> Hello everyone,
>
> I recently ran into a minor problem running ENZO on Ranger after installing
> YT.
>
>  If you prepend LD_LIBRARY_PATH with the YT paths, enzo will not be happy
> since (at least in my case) it looks for HDF5 v 1.6.5  and the new YT paths
> provide v 1.6.8.
>
> Simple work around:   I only change the library path when the YT modules
> are loaded.  I included the path with my commands to swap the pgi with gcc
> modules.
>
>
> Best,
>
> Carolyn_______________________________________________
> yt-users mailing list
> yt-users at lists.spacepope.org
> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
>
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