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<p>4 new commits in yt:</p>
<p><a href="https://bitbucket.org/yt_analysis/yt/commits/a42972338dc7/">https://bitbucket.org/yt_analysis/yt/commits/a42972338dc7/</a> Changeset: a42972338dc7 Branch: yt User: MatthewTurk Date: 2016-04-07 15:07:38+00:00 Summary: Ensuring mask for dt in octree is in correct order. Adding test. Affected #: 2 files</p>
<p>diff -r d5af145f1ac7993c2f94c2a4cc0d75824d019f98 -r a42972338dc76f36212c327b3af6adbc5594755c yt/data_objects/octree_subset.py --- a/yt/data_objects/octree_subset.py +++ b/yt/data_objects/octree_subset.py @@ -125,7 +125,7 @@</p>
<pre># memory usage.
dts, ts = [], []
for sl, mask in self.select_blocks(dobj.selector):</pre>
<ul><li><p>sl.child_mask = mask</p></li></ul>
<p>+ sl.child_mask = np.asfortranarray(mask)</p>
<pre>dt, t = dobj.selector.get_dt(sl)
dts.append(dt)
ts.append(t)</pre>
<p>diff -r d5af145f1ac7993c2f94c2a4cc0d75824d019f98 -r a42972338dc76f36212c327b3af6adbc5594755c yt/data_objects/tests/test_rays.py --- a/yt/data_objects/tests/test_rays.py +++ b/yt/data_objects/tests/test_rays.py @@ -48,3 +48,11 @@</p>
<pre>yield assert_rel_equal, my_ray['density'][ray_cells].sum(), \
my_all['density'][my_cells].sum(), 14
yield assert_rel_equal, my_ray['dts'].sum(), unitary, 14</pre>
<p>+ +@requires_file('GadgetDiskGalaxy/snapshot_200.hdf5') +def test_ray_in_particle_octree(): + ds = load('GadgetDiskGalaxy/snapshot_200.hdf5') + start = ds.arr([31995.63476562, 31473.6640625, 28969.88671875], “code_length”) + end = ds.arr([31995.63476562, 31473.6640625, 29219.88671875], “code_length”) + ray = ds.ray(start, end) + assert_equal(ray["dts"].sum(dtype="f8"), 1.0)</p>
<p><a href="https://bitbucket.org/yt_analysis/yt/commits/b1376550c125/">https://bitbucket.org/yt_analysis/yt/commits/b1376550c125/</a> Changeset: b1376550c125 Branch: yt User: MatthewTurk Date: 2016-04-07 15:55:46+00:00 Summary: Adding imports Affected #: 1 file</p>
<p>diff -r a42972338dc76f36212c327b3af6adbc5594755c -r b1376550c125e79cc5141ebd7cd5c875df01e955 yt/data_objects/tests/test_rays.py --- a/yt/data_objects/tests/test_rays.py +++ b/yt/data_objects/tests/test_rays.py @@ -1,9 +1,12 @@</p>
<pre>import numpy as np
</pre>
<p>+from yt import \ + load</p>
<pre>from yt.testing import \
fake_random_ds, \
assert_equal, \</pre>
<ul><li><p>assert_rel_equal</p></li></ul>
<p>+ assert_rel_equal, \ + requires_file</p>
<pre>from yt.units.yt_array import \
uconcatenate
</pre>
<p><a href="https://bitbucket.org/yt_analysis/yt/commits/de486f6230b1/">https://bitbucket.org/yt_analysis/yt/commits/de486f6230b1/</a> Changeset: de486f6230b1 Branch: yt User: MatthewTurk Date: 2016-04-07 17:24:43+00:00 Summary: Making sure we have dts/t Affected #: 1 file</p>
<p>diff -r b1376550c125e79cc5141ebd7cd5c875df01e955 -r de486f6230b18802c8f0ca3b1457a6b1fca13dae yt/data_objects/tests/test_rays.py --- a/yt/data_objects/tests/test_rays.py +++ b/yt/data_objects/tests/test_rays.py @@ -58,4 +58,5 @@</p>
<pre>start = ds.arr([31995.63476562, 31473.6640625, 28969.88671875], "code_length")
end = ds.arr([31995.63476562, 31473.6640625, 29219.88671875], "code_length")
ray = ds.ray(start, end)</pre>
<p>+ ray["t"]</p>
<pre>assert_equal(ray["dts"].sum(dtype="f8"), 1.0)</pre>
<p><a href="https://bitbucket.org/yt_analysis/yt/commits/a3f0bf738e65/">https://bitbucket.org/yt_analysis/yt/commits/a3f0bf738e65/</a> Changeset: a3f0bf738e65 Branch: yt User: ngoldbaum Date: 2016-04-19 20:39:43+00:00 Summary: Merged in MatthewTurk/yt (pull request #2116)</p>
<p>Ensuring mask for dt in octree is in correct order. Closes #1175 Affected #: 2 files</p>
<p>diff -r d8eec89b2c86f300ce9cfb0205b97cefb5dd0c45 -r a3f0bf738e6566959d9144adc81c2a918099615b yt/data_objects/octree_subset.py --- a/yt/data_objects/octree_subset.py +++ b/yt/data_objects/octree_subset.py @@ -125,7 +125,7 @@</p>
<pre># memory usage.
dts, ts = [], []
for sl, mask in self.select_blocks(dobj.selector):</pre>
<ul><li><p>sl.child_mask = mask</p></li></ul>
<p>+ sl.child_mask = np.asfortranarray(mask)</p>
<pre>dt, t = dobj.selector.get_dt(sl)
dts.append(dt)
ts.append(t)</pre>
<p>diff -r d8eec89b2c86f300ce9cfb0205b97cefb5dd0c45 -r a3f0bf738e6566959d9144adc81c2a918099615b yt/data_objects/tests/test_rays.py --- a/yt/data_objects/tests/test_rays.py +++ b/yt/data_objects/tests/test_rays.py @@ -1,9 +1,12 @@</p>
<pre>import numpy as np
</pre>
<p>+from yt import \ + load</p>
<pre>from yt.testing import \
fake_random_ds, \
assert_equal, \</pre>
<ul><li><p>assert_rel_equal</p></li></ul>
<p>+ assert_rel_equal, \ + requires_file</p>
<pre>from yt.units.yt_array import \
uconcatenate
</pre>
<p>@@ -48,3 +51,12 @@</p>
<pre>yield assert_rel_equal, my_ray['density'][ray_cells].sum(), \
my_all['density'][my_cells].sum(), 14
yield assert_rel_equal, my_ray['dts'].sum(), unitary, 14</pre>
<p>+ +@requires_file('GadgetDiskGalaxy/snapshot_200.hdf5') +def test_ray_in_particle_octree(): + ds = load('GadgetDiskGalaxy/snapshot_200.hdf5') + start = ds.arr([31995.63476562, 31473.6640625, 28969.88671875], “code_length”) + end = ds.arr([31995.63476562, 31473.6640625, 29219.88671875], “code_length”) + ray = ds.ray(start, end) + ray["t"] + assert_equal(ray["dts"].sum(dtype="f8"), 1.0)</p>
<p>Repository URL: <a href="https://bitbucket.org/yt_analysis/yt/">https://bitbucket.org/yt_analysis/yt/</a></p>
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