[yt-svn] commit/yt: 6 new changesets
commits-noreply at bitbucket.org
commits-noreply at bitbucket.org
Mon May 15 10:28:27 PDT 2017
6 new commits in yt:
https://bitbucket.org/yt_analysis/yt/commits/0f14d29ed891/
Changeset: 0f14d29ed891
User: MatthewTurk
Date: 2017-05-12 21:39:45+00:00
Summary: Adding some logos
Affected #: 2 files
diff -r 9921b57c74edb63adf0c6faecfe158b2d84eaab0 -r 0f14d29ed891faa870886f149dde173dfc23584d doc/source/_static/yt_logo.png
Binary file doc/source/_static/yt_logo.png has changed
diff -r 9921b57c74edb63adf0c6faecfe158b2d84eaab0 -r 0f14d29ed891faa870886f149dde173dfc23584d doc/source/_static/yt_logo.svg
--- /dev/null
+++ b/doc/source/_static/yt_logo.svg
@@ -0,0 +1,37 @@
+<?xml version="1.0" encoding="utf-8"?>
+<!-- Generator: Adobe Illustrator 19.2.1, SVG Export Plug-In . SVG Version: 6.00 Build 0) -->
+<svg version="1.1" id="Layer_1" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" x="0px" y="0px"
+ viewBox="0 0 416.7 360" style="enable-background:new 0 0 416.7 360;" xml:space="preserve">
+<style type="text/css">
+ .st0{opacity:0.55;fill:#00A3BB;}
+ .st1{opacity:0.55;fill:#F26222;}
+ .st2{opacity:0.55;}
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+ z"/>
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https://bitbucket.org/yt_analysis/yt/commits/0d7507bdb57c/
Changeset: 0d7507bdb57c
User: MatthewTurk
Date: 2017-05-12 21:39:54+00:00
Summary: Changing README to README.md and updating content
Affected #: 2 files
diff -r 0f14d29ed891faa870886f149dde173dfc23584d -r 0d7507bdb57cef5248adbc6096d217b8345693a2 README
--- a/README
+++ /dev/null
@@ -1,24 +0,0 @@
-Hi there! You've just downloaded yt, an analysis tool for scientific
-datasets, generated on a variety of data platforms. It's written in
-python and heavily leverages NumPy, Matplotlib, SymPy and Cython for a variety
-of tasks.
-
-Full documentation and a user community can be found at:
-
-http://yt-project.org/
-
-http://yt-project.org/doc/
-
-If you have used Python before, and are comfortable with installing packages,
-you should find the setup.py script fairly straightforward: simply execute
-"python setup.py install".
-
-If you would rather a more automated installation, you can use the script
-doc/install_script.sh . You will have to set the destination directory, and
-there are options available, but it should be straightforward.
-
-For more information on installation, what to do if you run into problems, or
-ways to help development, please visit our website.
-
-Enjoy!
-
diff -r 0f14d29ed891faa870886f149dde173dfc23584d -r 0d7507bdb57cef5248adbc6096d217b8345693a2 README.md
--- /dev/null
+++ b/README.md
@@ -0,0 +1,85 @@
+# The yt Project
+
+[](http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org/)
+[](http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org/)
+[](https://travis-ci.org/yt-project/yt)
+[](http://yt-project.org/docs/dev/)
+[](https://hub.yt/)
+
+[](http://yt-project.org/)
+
+yt is an open-source, permissively-licensed python package for analyzing and
+visualizing volumetric data.
+
+yt supports structured, variable-resolution meshes, unstructured meshes, and
+discrete or sampled data such as particles. Focused on driving
+physically-meaningful inquiry, yt has been applied in domains such as
+astrophysics, seismology, nuclear engineering, molecular dynamics, and
+oceanography. Composed of a friendly community of users and developers, we want
+to make it easy to use and develop — we'd love it if you got involved!
+
+We've written a [method
+paper](http://adsabs.harvard.edu/abs/2011ApJS..192....9T) you may be interested
+in; if you use yt in the preparation of a publication, please consider citing
+it.
+
+## Installation
+
+If you're using conda with [conda-forge](http://conda-forge.github.io/), you
+can install the most recent stable version by running:
+
+```
+conda install yt
+```
+
+Or, if you want the latest nightly build, you can manually install from our
+repository:
+
+```
+conda install -c http://use.yt/with_conda yt
+```
+
+To get set up with a development version, you can clone this repository and
+install like this:
+
+```
+git clone https://github.com/yt-project/yt
+cd yt
+python setup.py develop
+```
+
+## Getting Started
+
+yt is designed to provide meaningful analysis of data. We have some Quickstart
+example notebooks in the repository:
+
+ * [Introduction](doc/source/quickstart/1\)_Introduction.ipynb)
+ * [Data Inspection](doc/source/quickstart/2\)_Data_Inspection.ipynb)
+ * [Simple Visualization](doc/source/quickstart/3\)_Simple_Visualization.ipynb)
+ * [Data Objects and Time Series](doc/source/quickstart/4\)_Data_Objects_and_Time_Series.ipynb)
+ * [Derived Fields and Profiles](doc/source/quickstart/5\)_Derived_Fields_and_Profiles.ipynb)
+ * [Volume Rendering](doc/source/quickstart/6\)_Volume_Rendering.ipynb)
+
+If you'd like to try these online, you can visit our [yt Hub](https://hub.yt/)
+and run a notebook next to some of our example data.
+
+## Contributing
+
+We love contributions! yt is open source, built on open source, and we'd love
+to have you hang out in our community.
+
+We have developed some [guidelines](CONTRIBUTING.rst) for contributing to yt.
+
+## Resources
+
+We have some community and documentation resources available.
+
+ * Our latest documentation is always at http://yt-project.org/docs/dev/ and it
+ includes recipes, tutorials, and API documentation
+ * The [discussion mailing
+ list](http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org/)
+ should be your first stop for general questions
+ * The [development mailing
+ list](http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org/) is
+ better suited for more development issues
+ * You can also join us on Slack at yt-project.slack.com
https://bitbucket.org/yt_analysis/yt/commits/3abe16c82bac/
Changeset: 3abe16c82bac
User: MatthewTurk
Date: 2017-05-15 13:32:23+00:00
Summary: Updating from comments!
Affected #: 2 files
diff -r 0d7507bdb57cef5248adbc6096d217b8345693a2 -r 3abe16c82bac258acd74ab122c9f3e10d5204189 README.md
--- a/README.md
+++ b/README.md
@@ -6,7 +6,7 @@
[](http://yt-project.org/docs/dev/)
[](https://hub.yt/)
-[](http://yt-project.org/)
+<a href="http://yt-project.org"><img src="doc/source/_static/yt_logo.png" width="300"></a>
yt is an open-source, permissively-licensed python package for analyzing and
visualizing volumetric data.
@@ -29,10 +29,16 @@
can install the most recent stable version by running:
```
-conda install yt
+conda install -c conda-forge yt
```
-Or, if you want the latest nightly build, you can manually install from our
+or by doing:
+
+```
+pip install yt
+```
+
+If you want the latest nightly build, you can manually install from our
repository:
```
@@ -43,11 +49,31 @@
install like this:
```
-git clone https://github.com/yt-project/yt
-cd yt
+git clone https://github.com/yt-project/yt yt-git
+cd yt-git
python setup.py develop
```
+To set up yt in a virtualenv (and there are [many good
+reasons](https://packaging.python.org/installing/#creating-virtual-environments)
+to do so!) you can follow this prescription:
+
+```
+# Assuming you have cd'd into yt (or yt-git)
+# It is conventional to create virtualenvs at ~/.virtualenv/
+$ mkdir -p ~/.virtualenv
+# Assuming your version of Python 3 is 3.4 or higher,
+# create a virtualenv named yt
+$ python3 -m venv ~/.virtualenv/yt
+# Activate it
+$ source ~/.virtualenv/yt/bin/activate
+# Make sure you run the latest version of pip
+$ pip install --upgrade pip
+$ pip install -e .
+# Output installed packages
+$ pip freeze
+```
+
## Getting Started
yt is designed to provide meaningful analysis of data. We have some Quickstart
@@ -82,4 +108,5 @@
* The [development mailing
list](http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org/) is
better suited for more development issues
- * You can also join us on Slack at yt-project.slack.com
+ * You can also join us on Slack at yt-project.slack.com ([request an
+ invite](http://yt-project.org/slack.html))
diff -r 0d7507bdb57cef5248adbc6096d217b8345693a2 -r 3abe16c82bac258acd74ab122c9f3e10d5204189 setup.py
--- a/setup.py
+++ b/setup.py
@@ -37,6 +37,12 @@
if os.path.exists('MANIFEST'):
os.remove('MANIFEST')
+try:
+ import pypandoc
+ long_description = pypandoc.convert_file('README.md', 'rst')
+except (ImportError, IOError):
+ with open('README.md') as file:
+ long_description = file.read()
if check_for_openmp() is True:
omp_args = ['-fopenmp']
@@ -328,7 +334,22 @@
# subclass setuptools source distribution builder to ensure cython
# generated C files are included in source distribution.
# See http://stackoverflow.com/a/18418524/1382869
+ # subclass setuptools source distribution builder to ensure cython
+ # generated C files are included in source distribution and readme
+ # is converted from markdown to restructured text. See
+ # http://stackoverflow.com/a/18418524/1382869
def run(self):
+ # Make sure the compiled Cython files in the distribution are
+ # up-to-date
+
+ try:
+ import pypandoc
+ except ImportError:
+ raise RuntimeError(
+ 'Trying to create a source distribution without pypandoc. '
+ 'The readme will not render correctly on pypi without '
+ 'pypandoc so we are exiting.'
+ )
# Make sure the compiled Cython files in the distribution are up-to-date
from Cython.Build import cythonize
cythonize(cython_extensions)
@@ -338,6 +359,7 @@
name="yt",
version=VERSION,
description="An analysis and visualization toolkit for volumetric data",
+ long_description = long_description,
classifiers=["Development Status :: 5 - Production/Stable",
"Environment :: Console",
"Intended Audience :: Science/Research",
https://bitbucket.org/yt_analysis/yt/commits/67f6ae48573d/
Changeset: 67f6ae48573d
User: MatthewTurk
Date: 2017-05-15 15:03:45+00:00
Summary: Fixing unicode emdash
Affected #: 1 file
diff -r 3abe16c82bac258acd74ab122c9f3e10d5204189 -r 67f6ae48573d3712e16a97238fc8b7f0506ab454 README.md
--- a/README.md
+++ b/README.md
@@ -16,7 +16,7 @@
physically-meaningful inquiry, yt has been applied in domains such as
astrophysics, seismology, nuclear engineering, molecular dynamics, and
oceanography. Composed of a friendly community of users and developers, we want
-to make it easy to use and develop — we'd love it if you got involved!
+to make it easy to use and develop - we'd love it if you got involved!
We've written a [method
paper](http://adsabs.harvard.edu/abs/2011ApJS..192....9T) you may be interested
https://bitbucket.org/yt_analysis/yt/commits/2b3d27b88822/
Changeset: 2b3d27b88822
User: MatthewTurk
Date: 2017-05-15 15:04:40+00:00
Summary: Adjusting directory name to just "yt-git"
Affected #: 1 file
diff -r 67f6ae48573d3712e16a97238fc8b7f0506ab454 -r 2b3d27b88822863191d5bbc4132353f0d91180da README.md
--- a/README.md
+++ b/README.md
@@ -59,7 +59,7 @@
to do so!) you can follow this prescription:
```
-# Assuming you have cd'd into yt (or yt-git)
+# Assuming you have cd'd into yt-git
# It is conventional to create virtualenvs at ~/.virtualenv/
$ mkdir -p ~/.virtualenv
# Assuming your version of Python 3 is 3.4 or higher,
https://bitbucket.org/yt_analysis/yt/commits/33a88cc4dc4b/
Changeset: 33a88cc4dc4b
User: ngoldbaum
Date: 2017-05-15 17:28:03+00:00
Summary: Merge pull request #1387 from MatthewTurk/readme-fancification
Readme fancification. Closes #1385
Affected #: 5 files
diff -r 31f9175e8d8bce23bc870fd6c092011e2acf3964 -r 33a88cc4dc4b27ab5132f033b7d3e00e5d0f972f README
--- a/README
+++ /dev/null
@@ -1,24 +0,0 @@
-Hi there! You've just downloaded yt, an analysis tool for scientific
-datasets, generated on a variety of data platforms. It's written in
-python and heavily leverages NumPy, Matplotlib, SymPy and Cython for a variety
-of tasks.
-
-Full documentation and a user community can be found at:
-
-http://yt-project.org/
-
-http://yt-project.org/doc/
-
-If you have used Python before, and are comfortable with installing packages,
-you should find the setup.py script fairly straightforward: simply execute
-"python setup.py install".
-
-If you would rather a more automated installation, you can use the script
-doc/install_script.sh . You will have to set the destination directory, and
-there are options available, but it should be straightforward.
-
-For more information on installation, what to do if you run into problems, or
-ways to help development, please visit our website.
-
-Enjoy!
-
diff -r 31f9175e8d8bce23bc870fd6c092011e2acf3964 -r 33a88cc4dc4b27ab5132f033b7d3e00e5d0f972f README.md
--- /dev/null
+++ b/README.md
@@ -0,0 +1,112 @@
+# The yt Project
+
+[](http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org/)
+[](http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org/)
+[](https://travis-ci.org/yt-project/yt)
+[](http://yt-project.org/docs/dev/)
+[](https://hub.yt/)
+
+<a href="http://yt-project.org"><img src="doc/source/_static/yt_logo.png" width="300"></a>
+
+yt is an open-source, permissively-licensed python package for analyzing and
+visualizing volumetric data.
+
+yt supports structured, variable-resolution meshes, unstructured meshes, and
+discrete or sampled data such as particles. Focused on driving
+physically-meaningful inquiry, yt has been applied in domains such as
+astrophysics, seismology, nuclear engineering, molecular dynamics, and
+oceanography. Composed of a friendly community of users and developers, we want
+to make it easy to use and develop - we'd love it if you got involved!
+
+We've written a [method
+paper](http://adsabs.harvard.edu/abs/2011ApJS..192....9T) you may be interested
+in; if you use yt in the preparation of a publication, please consider citing
+it.
+
+## Installation
+
+If you're using conda with [conda-forge](http://conda-forge.github.io/), you
+can install the most recent stable version by running:
+
+```
+conda install -c conda-forge yt
+```
+
+or by doing:
+
+```
+pip install yt
+```
+
+If you want the latest nightly build, you can manually install from our
+repository:
+
+```
+conda install -c http://use.yt/with_conda yt
+```
+
+To get set up with a development version, you can clone this repository and
+install like this:
+
+```
+git clone https://github.com/yt-project/yt yt-git
+cd yt-git
+python setup.py develop
+```
+
+To set up yt in a virtualenv (and there are [many good
+reasons](https://packaging.python.org/installing/#creating-virtual-environments)
+to do so!) you can follow this prescription:
+
+```
+# Assuming you have cd'd into yt-git
+# It is conventional to create virtualenvs at ~/.virtualenv/
+$ mkdir -p ~/.virtualenv
+# Assuming your version of Python 3 is 3.4 or higher,
+# create a virtualenv named yt
+$ python3 -m venv ~/.virtualenv/yt
+# Activate it
+$ source ~/.virtualenv/yt/bin/activate
+# Make sure you run the latest version of pip
+$ pip install --upgrade pip
+$ pip install -e .
+# Output installed packages
+$ pip freeze
+```
+
+## Getting Started
+
+yt is designed to provide meaningful analysis of data. We have some Quickstart
+example notebooks in the repository:
+
+ * [Introduction](doc/source/quickstart/1\)_Introduction.ipynb)
+ * [Data Inspection](doc/source/quickstart/2\)_Data_Inspection.ipynb)
+ * [Simple Visualization](doc/source/quickstart/3\)_Simple_Visualization.ipynb)
+ * [Data Objects and Time Series](doc/source/quickstart/4\)_Data_Objects_and_Time_Series.ipynb)
+ * [Derived Fields and Profiles](doc/source/quickstart/5\)_Derived_Fields_and_Profiles.ipynb)
+ * [Volume Rendering](doc/source/quickstart/6\)_Volume_Rendering.ipynb)
+
+If you'd like to try these online, you can visit our [yt Hub](https://hub.yt/)
+and run a notebook next to some of our example data.
+
+## Contributing
+
+We love contributions! yt is open source, built on open source, and we'd love
+to have you hang out in our community.
+
+We have developed some [guidelines](CONTRIBUTING.rst) for contributing to yt.
+
+## Resources
+
+We have some community and documentation resources available.
+
+ * Our latest documentation is always at http://yt-project.org/docs/dev/ and it
+ includes recipes, tutorials, and API documentation
+ * The [discussion mailing
+ list](http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org/)
+ should be your first stop for general questions
+ * The [development mailing
+ list](http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org/) is
+ better suited for more development issues
+ * You can also join us on Slack at yt-project.slack.com ([request an
+ invite](http://yt-project.org/slack.html))
diff -r 31f9175e8d8bce23bc870fd6c092011e2acf3964 -r 33a88cc4dc4b27ab5132f033b7d3e00e5d0f972f doc/source/_static/yt_logo.png
Binary file doc/source/_static/yt_logo.png has changed
diff -r 31f9175e8d8bce23bc870fd6c092011e2acf3964 -r 33a88cc4dc4b27ab5132f033b7d3e00e5d0f972f doc/source/_static/yt_logo.svg
--- /dev/null
+++ b/doc/source/_static/yt_logo.svg
@@ -0,0 +1,37 @@
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+ viewBox="0 0 416.7 360" style="enable-background:new 0 0 416.7 360;" xml:space="preserve">
+<style type="text/css">
+ .st0{opacity:0.55;fill:#00A3BB;}
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+ .st3{fill:#EF3A24;}
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diff -r 31f9175e8d8bce23bc870fd6c092011e2acf3964 -r 33a88cc4dc4b27ab5132f033b7d3e00e5d0f972f setup.py
--- a/setup.py
+++ b/setup.py
@@ -37,6 +37,12 @@
if os.path.exists('MANIFEST'):
os.remove('MANIFEST')
+try:
+ import pypandoc
+ long_description = pypandoc.convert_file('README.md', 'rst')
+except (ImportError, IOError):
+ with open('README.md') as file:
+ long_description = file.read()
if check_for_openmp() is True:
omp_args = ['-fopenmp']
@@ -328,7 +334,22 @@
# subclass setuptools source distribution builder to ensure cython
# generated C files are included in source distribution.
# See http://stackoverflow.com/a/18418524/1382869
+ # subclass setuptools source distribution builder to ensure cython
+ # generated C files are included in source distribution and readme
+ # is converted from markdown to restructured text. See
+ # http://stackoverflow.com/a/18418524/1382869
def run(self):
+ # Make sure the compiled Cython files in the distribution are
+ # up-to-date
+
+ try:
+ import pypandoc
+ except ImportError:
+ raise RuntimeError(
+ 'Trying to create a source distribution without pypandoc. '
+ 'The readme will not render correctly on pypi without '
+ 'pypandoc so we are exiting.'
+ )
# Make sure the compiled Cython files in the distribution are up-to-date
from Cython.Build import cythonize
cythonize(cython_extensions)
@@ -338,6 +359,7 @@
name="yt",
version=VERSION,
description="An analysis and visualization toolkit for volumetric data",
+ long_description = long_description,
classifiers=["Development Status :: 5 - Production/Stable",
"Environment :: Console",
"Intended Audience :: Science/Research",
Repository URL: https://bitbucket.org/yt_analysis/yt/
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