[yt-svn] commit/yt: ngoldbaum: Merged in ngoldbaum/yt (pull request #2533)

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1 new commit in yt:

https://bitbucket.org/yt_analysis/yt/commits/5d0ca754ce74/
Changeset:   5d0ca754ce74
Branch:      yt
User:        ngoldbaum
Date:        2017-03-15 19:02:53+00:00
Summary:     Merged in ngoldbaum/yt (pull request #2533)

Remove unused yt.utilities.exodusII_reader module

Approved-by: Kacper Kowalik
Approved-by: Britton Smith
Approved-by: Andrew Myers
Affected #:  1 file

diff -r 95401107ce0793c6b74d10c336f0633aaee990d5 -r 5d0ca754ce74cc7e3f4dac94257713032073ec5b yt/utilities/exodusII_reader.py
--- a/yt/utilities/exodusII_reader.py
+++ /dev/null
@@ -1,51 +0,0 @@
-import string
-from itertools import takewhile
-from netCDF4 import Dataset
-import numpy as np
-from yt.config import ytcfg
-import os
-import warnings
-
-
-def sanitize_string(s):
-    s = "".join(_ for _ in takewhile(lambda a: a in string.printable, s))
-    return s
-
-
-def get_data(fn):
-    warnings.warn("The yt.utilities.exodusII_reader module is deprecated "
-                  "and will be removed in a future release. "
-                  "Please use the normal yt.load() command to access "
-                  "your data instead.")
-    try:
-        f = Dataset(fn)
-    except RuntimeError:
-        f = Dataset(os.path.join(ytcfg.get("yt", "test_data_dir"), fn))
-    fvars = f.variables
-    # Is this correct?
-    etypes = fvars["eb_status"][:]
-    nelem = etypes.shape[0]
-    varnames = [sanitize_string(v.tostring()) for v in
-                fvars["name_elem_var"][:]]
-    nodnames = [sanitize_string(v.tostring()) for v in
-                fvars["name_nod_var"][:]]
-    coord = np.array([fvars["coord%s" % ax][:]
-                     for ax in 'xyz']).transpose().copy()
-    coords = []
-    connects = []
-    data = []
-    for i in range(nelem):
-        connects.append(fvars["connect%s" % (i+1)][:].astype("i8"))
-        ci = connects[-1]
-        coords.append(coord)  # Same for all
-        vals = {}
-        for j, v in enumerate(varnames):
-            values = fvars["vals_elem_var%seb%s" % (j+1, i+1)][:]
-            vals['gas', v] = values.astype("f8")[-1, :]
-        for j, v in enumerate(nodnames):
-            # We want just for this set of nodes all the node variables
-            # Use (ci - 1) to get these values
-            values = fvars["vals_nod_var%s" % (j+1)][:]
-            vals['gas', v] = values.astype("f8")[-1, ci - 1, ...]
-        data.append(vals)
-    return coords, connects, data

Repository URL: https://bitbucket.org/yt_analysis/yt/

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