[yt-svn] commit/yt-3.0: MatthewTurk: Fix for SPH datasets and a hotfix for ARTIO Cython speed.

[commits-noreply at bitbucket.org]

1 new commit in yt-3.0:

https://bitbucket.org/yt_analysis/yt-3.0/commits/f8c52554df0d/
Changeset:   f8c52554df0d
Branch:      yt-3.0
User:        MatthewTurk
Date:        2013-09-09 22:10:59
Summary:     Fix for SPH datasets and a hotfix for ARTIO Cython speed.
Affected #:  3 files

diff -r f462e06e6a772cd5277184469803c52404d1ea12 -r f8c52554df0d446ee7a95319cd97d695bdb94243 yt/frontends/artio/_artio_caller.pyx
--- a/yt/frontends/artio/_artio_caller.pyx
+++ b/yt/frontends/artio/_artio_caller.pyx
@@ -718,6 +718,7 @@
         cdef np.ndarray[np.float32_t, ndim=2] source
         cdef np.ndarray[np.float64_t, ndim=1] dest
         cdef int n, status, i, di, num_oct_levels, nf, ngv, max_level
+        cdef int j, oct_ind, level
         cdef np.int64_t sfc
         cdef np.float64_t val
         cdef artio_fileset_handle *handle = self.artio_handle.handle

diff -r f462e06e6a772cd5277184469803c52404d1ea12 -r f8c52554df0d446ee7a95319cd97d695bdb94243 yt/frontends/sph/data_structures.py
--- a/yt/frontends/sph/data_structures.py
+++ b/yt/frontends/sph/data_structures.py
@@ -275,6 +275,7 @@
     def __init__(self, filename, data_style="OWLS", n_ref = 64,
                  over_refine_factor = 1):
         self.storage_filename = None
+        filename = os.path.abspath(filename)
         super(OWLSStaticOutput, self).__init__(
                                filename, data_style,
                                unit_base = None, n_ref = n_ref,

diff -r f462e06e6a772cd5277184469803c52404d1ea12 -r f8c52554df0d446ee7a95319cd97d695bdb94243 yt/utilities/answer_testing/framework.py
--- a/yt/utilities/answer_testing/framework.py
+++ b/yt/utilities/answer_testing/framework.py
@@ -394,7 +394,7 @@
         return np.array([avg, mi, ma])
 
     def compare(self, new_result, old_result):
-        err_msg = "Field values for %s not equal." % self.field
+        err_msg = "Field values for %s not equal." % (self.field,)
         if self.decimals is None:
             assert_equal(new_result, old_result,
                          err_msg=err_msg, verbose=True)

Repository URL: https://bitbucket.org/yt_analysis/yt-3.0/

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