[yt-svn] commit/yt-doc: 2 new changesets
commits-noreply at bitbucket.org
commits-noreply at bitbucket.org
Wed Nov 6 07:18:10 PST 2013
2 new commits in yt-doc:
https://bitbucket.org/yt_analysis/yt-doc/commits/38ea947ebf91/
Changeset: 38ea947ebf91
User: brittonsmith
Date: 2013-11-05 16:54:25
Summary: Reorganizing the analysis modules docs.
Affected #: 5 files
diff -r aa482e4881748677e642ab64369bc601b2ad442e -r 38ea947ebf915c9e23040f138de5baa9e7bba989 source/analyzing/analysis_modules/exporting.rst
--- /dev/null
+++ b/source/analyzing/analysis_modules/exporting.rst
@@ -0,0 +1,8 @@
+Exporting to External Radiation Transport Codes
+===============================================
+
+.. toctree::
+ :maxdepth: 2
+
+ sunrise_export
+ radmc3d_export
\ No newline at end of file
diff -r aa482e4881748677e642ab64369bc601b2ad442e -r 38ea947ebf915c9e23040f138de5baa9e7bba989 source/analyzing/analysis_modules/halo_analysis.rst
--- /dev/null
+++ b/source/analyzing/analysis_modules/halo_analysis.rst
@@ -0,0 +1,14 @@
+Halo Analysis
+=============
+
+Halo finding, mass functions, merger trees, and profiling.
+
+.. toctree::
+ :maxdepth: 1
+
+ running_halofinder
+ halo_mass_function
+ hmf_howto
+ merger_tree
+ halo_profiling
+ ellipsoid_analysis
diff -r aa482e4881748677e642ab64369bc601b2ad442e -r 38ea947ebf915c9e23040f138de5baa9e7bba989 source/analyzing/analysis_modules/index.rst
--- a/source/analyzing/analysis_modules/index.rst
+++ b/source/analyzing/analysis_modules/index.rst
@@ -8,27 +8,11 @@
-----------------------------
.. toctree::
- :maxdepth: 1
+ :maxdepth: 2
- running_halofinder
- hmf_howto
- halo_profiling
- light_cone_generator
- light_ray_generator
- planning_cosmology_simulations
- absorption_spectrum
- quick_start_fitting
- fitting_procedure
- star_analysis
- simulated_observations
- halo_mass_function
- merger_tree
- radial_column_density
- sunrise_export
- ellipsoid_analysis
- xray_emission_fields
- radmc3d_export
- sunyaev_zeldovich
+ halo_analysis
+ synthetic_observation
+ exporting
General Analysis Modules
------------------------
diff -r aa482e4881748677e642ab64369bc601b2ad442e -r 38ea947ebf915c9e23040f138de5baa9e7bba989 source/analyzing/analysis_modules/simulated_observations.rst
--- a/source/analyzing/analysis_modules/simulated_observations.rst
+++ /dev/null
@@ -1,66 +0,0 @@
-.. _simulated_observations:
-
-Generating Simulated Observations
-=================================
-
-yt has several facilities for generating simulated observations. Each of these
-comes with several caveats, and none should be expected to produce a completely
-finished product. You should investigate each option carefully and determine
-which, if any, will deliver the type of observation you are interested in.
-
-
-
-X-ray Observations
-++++++++++++++++++
-
-Under the assumption of optically thin gas, projections can be made
-using emissivity to generated simulated observations. yt includes a
-method for handling output from CLOUDY in the ROCO (Smith et al 2008)
-format, and generating integrated emissivity over given energy ranges.
-
-Caveats: The ROCO format for input requires some non-trivial handling
-of CLOUDY output.
-
-= SED Generation and Deposition =
-
-Using BC03 models for stellar population synthesis, star particles in
-a given calculation can be assigned an integrated flux for a specific
-bandpass. These fluxes can then be combined using either projections
-or volume rendering. This can use CIC interpolation to deposit a
-total flux into each cell (which should be flux-conserving, modulo a
-multiplicative factor not currently included) which is then either
-projected or volume rendered.
-
-Caveats: The deposition method produces far too washed out and murky
-results. The multiplicative factor is not currently set correctly
-universally.
-
-= Thermal Gas Emission =
-
-Applying a black body spectrum to the thermal content of the gas, we
-can volume render the domain and apply absorption based on broad
-arguments of scattering. One could theoretically include star
-particles as point sources in this, using recent changes to the volume
-renderer.
-
-Caveats: Scattering that results in re-emission is completely
-neglected, such as Halpha emission. Scattering that results in just
-attenuating the emission is set in an ad hoc fashion. Emission from
-point sources, if included at all, is included in a non-conservative
-fashion.
-
-= Export to Sunrise =
-
-Data can be exported to Sunrise for simulated observation generation.
-
-Caveats: This process is poorly documented.
-
-= SZ Compton y and SZ Kinetic Maps =
-
-Future Directions
------------------
-
-* ALMA maps
-* 21cm observations
-* Applying PSFs
-*
diff -r aa482e4881748677e642ab64369bc601b2ad442e -r 38ea947ebf915c9e23040f138de5baa9e7bba989 source/analyzing/analysis_modules/synthetic_observation.rst
--- /dev/null
+++ b/source/analyzing/analysis_modules/synthetic_observation.rst
@@ -0,0 +1,19 @@
+Synthetic Observation
+=====================
+
+Methods for generating various types of synthetic observations
+from simulation data.
+
+.. toctree::
+ :maxdepth: 1
+
+ light_cone_generator
+ light_ray_generator
+ planning_cosmology_simulations
+ absorption_spectrum
+ quick_start_fitting
+ fitting_procedure
+ star_analysis
+ xray_emission_fields
+ sunyaev_zeldovich
+ radial_column_density
https://bitbucket.org/yt_analysis/yt-doc/commits/508ac90e6f95/
Changeset: 508ac90e6f95
User: MatthewTurk
Date: 2013-11-06 16:18:05
Summary: Merged in brittonsmith/yt-doc (pull request #114)
Reorganizing the analysis modules docs.
Affected #: 5 files
diff -r d0bdc67d7bb611d5ca1b613df642a6b6b85c41cb -r 508ac90e6f959b4ab67051fafac64265c9ccf231 source/analyzing/analysis_modules/exporting.rst
--- /dev/null
+++ b/source/analyzing/analysis_modules/exporting.rst
@@ -0,0 +1,8 @@
+Exporting to External Radiation Transport Codes
+===============================================
+
+.. toctree::
+ :maxdepth: 2
+
+ sunrise_export
+ radmc3d_export
\ No newline at end of file
diff -r d0bdc67d7bb611d5ca1b613df642a6b6b85c41cb -r 508ac90e6f959b4ab67051fafac64265c9ccf231 source/analyzing/analysis_modules/halo_analysis.rst
--- /dev/null
+++ b/source/analyzing/analysis_modules/halo_analysis.rst
@@ -0,0 +1,14 @@
+Halo Analysis
+=============
+
+Halo finding, mass functions, merger trees, and profiling.
+
+.. toctree::
+ :maxdepth: 1
+
+ running_halofinder
+ halo_mass_function
+ hmf_howto
+ merger_tree
+ halo_profiling
+ ellipsoid_analysis
diff -r d0bdc67d7bb611d5ca1b613df642a6b6b85c41cb -r 508ac90e6f959b4ab67051fafac64265c9ccf231 source/analyzing/analysis_modules/index.rst
--- a/source/analyzing/analysis_modules/index.rst
+++ b/source/analyzing/analysis_modules/index.rst
@@ -8,27 +8,11 @@
-----------------------------
.. toctree::
- :maxdepth: 1
+ :maxdepth: 2
- running_halofinder
- hmf_howto
- halo_profiling
- light_cone_generator
- light_ray_generator
- planning_cosmology_simulations
- absorption_spectrum
- quick_start_fitting
- fitting_procedure
- star_analysis
- simulated_observations
- halo_mass_function
- merger_tree
- radial_column_density
- sunrise_export
- ellipsoid_analysis
- xray_emission_fields
- radmc3d_export
- sunyaev_zeldovich
+ halo_analysis
+ synthetic_observation
+ exporting
General Analysis Modules
------------------------
diff -r d0bdc67d7bb611d5ca1b613df642a6b6b85c41cb -r 508ac90e6f959b4ab67051fafac64265c9ccf231 source/analyzing/analysis_modules/simulated_observations.rst
--- a/source/analyzing/analysis_modules/simulated_observations.rst
+++ /dev/null
@@ -1,66 +0,0 @@
-.. _simulated_observations:
-
-Generating Simulated Observations
-=================================
-
-yt has several facilities for generating simulated observations. Each of these
-comes with several caveats, and none should be expected to produce a completely
-finished product. You should investigate each option carefully and determine
-which, if any, will deliver the type of observation you are interested in.
-
-
-
-X-ray Observations
-++++++++++++++++++
-
-Under the assumption of optically thin gas, projections can be made
-using emissivity to generated simulated observations. yt includes a
-method for handling output from CLOUDY in the ROCO (Smith et al 2008)
-format, and generating integrated emissivity over given energy ranges.
-
-Caveats: The ROCO format for input requires some non-trivial handling
-of CLOUDY output.
-
-= SED Generation and Deposition =
-
-Using BC03 models for stellar population synthesis, star particles in
-a given calculation can be assigned an integrated flux for a specific
-bandpass. These fluxes can then be combined using either projections
-or volume rendering. This can use CIC interpolation to deposit a
-total flux into each cell (which should be flux-conserving, modulo a
-multiplicative factor not currently included) which is then either
-projected or volume rendered.
-
-Caveats: The deposition method produces far too washed out and murky
-results. The multiplicative factor is not currently set correctly
-universally.
-
-= Thermal Gas Emission =
-
-Applying a black body spectrum to the thermal content of the gas, we
-can volume render the domain and apply absorption based on broad
-arguments of scattering. One could theoretically include star
-particles as point sources in this, using recent changes to the volume
-renderer.
-
-Caveats: Scattering that results in re-emission is completely
-neglected, such as Halpha emission. Scattering that results in just
-attenuating the emission is set in an ad hoc fashion. Emission from
-point sources, if included at all, is included in a non-conservative
-fashion.
-
-= Export to Sunrise =
-
-Data can be exported to Sunrise for simulated observation generation.
-
-Caveats: This process is poorly documented.
-
-= SZ Compton y and SZ Kinetic Maps =
-
-Future Directions
------------------
-
-* ALMA maps
-* 21cm observations
-* Applying PSFs
-*
diff -r d0bdc67d7bb611d5ca1b613df642a6b6b85c41cb -r 508ac90e6f959b4ab67051fafac64265c9ccf231 source/analyzing/analysis_modules/synthetic_observation.rst
--- /dev/null
+++ b/source/analyzing/analysis_modules/synthetic_observation.rst
@@ -0,0 +1,19 @@
+Synthetic Observation
+=====================
+
+Methods for generating various types of synthetic observations
+from simulation data.
+
+.. toctree::
+ :maxdepth: 1
+
+ light_cone_generator
+ light_ray_generator
+ planning_cosmology_simulations
+ absorption_spectrum
+ quick_start_fitting
+ fitting_procedure
+ star_analysis
+ xray_emission_fields
+ sunyaev_zeldovich
+ radial_column_density
Repository URL: https://bitbucket.org/yt_analysis/yt-doc/
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